WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y37E11AM.1b Sequence Name  Y37E11AM.1b
Length (nt)  2535   Chromosome Location  IV: 3728227-3728355
Chromosome . Primary Identifier  IV Chromosome Location . Start  3728227
Chromosome Location . End  3728355
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y37E11AM.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE48841 SMGL-2, isoform b 96.7 844 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00094307
WBRNAi00009305
WBRNAi00026650
WBRNAi00055905
WBRNAi00094031
WBRNAi00020225
WBRNAi00093537
WBRNAi00036799
WBRNAi00071508
WBRNAi00071507
WBRNAi00075509
WBRNAi00094423
WBRNAi00069879
WBRNAi00069877

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y37E11AM.1b 3728227 3728355 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00021365 smgl-2 Y37E11AM.1 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y37E11AM.1b 3728227 3728355 1
CDS:Y37E11AM.1b 3729051 3729335 1
CDS:Y37E11AM.1b 3730170 3730587 1
CDS:Y37E11AM.1b 3731182 3731770 1
CDS:Y37E11AM.1b 3732463 3732736 1
CDS:Y37E11AM.1b 3733635 3734180 1
CDS:Y37E11AM.1b 3735152 3735445 1

1 Sequence

Length
2535

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y37E11AM.1b.1 Y37E11AM.1b.1 2535   IV: 3728227-3735445