WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C41A3.1a Sequence Name  C41A3.1a
Length (nt)  23259   Chromosome Location  X: 5413810-5413895
Chromosome . Primary Identifier  X Chromosome Location . Start  5413810
Chromosome Location . End  5413895
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C41A3.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47147 PKS-1, isoform a 865.0 7752 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00001268
WBRNAi00042271
WBRNAi00011827

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C41A3.1a 5413810 5413895 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016558 pks-1 C41A3.1 Caenorhabditis elegans

30 Locations


Feature . Primary Identifier
Start End Strand
CDS:C41A3.1a 5413810 5413895 1
CDS:C41A3.1a 5414257 5414377 1
CDS:C41A3.1a 5414426 5414640 1
CDS:C41A3.1a 5414996 5415148 1
CDS:C41A3.1a 5415193 5415430 1
CDS:C41A3.1a 5415830 5415978 1
CDS:C41A3.1a 5416022 5418057 1
CDS:C41A3.1a 5418102 5418395 1
CDS:C41A3.1a 5418440 5418528 1
CDS:C41A3.1a 5418579 5418700 1
CDS:C41A3.1a 5419026 5419367 1
CDS:C41A3.1a 5419414 5420806 1
CDS:C41A3.1a 5421268 5421841 1
CDS:C41A3.1a 5421911 5422222 1
CDS:C41A3.1a 5422965 5423096 1
CDS:C41A3.1a 5423143 5425124 1
CDS:C41A3.1a 5425574 5425738 1
CDS:C41A3.1a 5425785 5425926 1
CDS:C41A3.1a 5425976 5427186 1
CDS:C41A3.1a 5427666 5427881 1
CDS:C41A3.1a 5427937 5429440 1
CDS:C41A3.1a 5429485 5429686 1
CDS:C41A3.1a 5429734 5440366 1
CDS:C41A3.1a 5440418 5440663 1
CDS:C41A3.1a 5440708 5440881 1
CDS:C41A3.1a 5441194 5441379 1
CDS:C41A3.1a 5441425 5441472 1
CDS:C41A3.1a 5441521 5441630 1
CDS:C41A3.1a 5441678 5441762 1
CDS:C41A3.1a 5441820 5441918 1

1 Sequence

Length
23259

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C41A3.1a.1 C41A3.1a.1 23299   X: 5413810-5441958