WormMine: CDS CDS:C54D2.5a

• WormMine ID: CDS:C54D2.5a
• Sequence Name: C54D2.5a
• Length (nt): 5514
• Chromosome Location: X: 7848224-7848278
• Chromosome . Primary Identifier: X
• Chromosome Location . Start: 7848224
• Chromosome Location . End: 7848278

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: C54D2.5a

Proteins

1 Protein

WormBase ID	Name	Molecular Weight (kDa)	Length	Organism
CE30919	CCA-1, isoform a	210.1	1837	Caenorhabditis elegans

Other

2 RNAi

WormBase ID
WBRNAi00043146
WBRNAi00012391

1 Chromosome

• WormBase ID: X
• Organism: Caenorhabditis elegans
• Length (nt): 17718942

1 Chromosome Location

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7848224
• End: 7848278
• Strand: -1

3 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)
• WormBase C. elegans CDS sequence (Fasta)

1 Gene

WormBase Gene ID	Gene Name	Sequence Name	Organism
WBGene00000367	cca-1	C54D2.5	Caenorhabditis elegans

29 Locations

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7848224
• End: 7848278
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7848334
• End: 7848500
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7849296
• End: 7849474
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7849590
• End: 7849788
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7850445
• End: 7850645
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7850689
• End: 7851047
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7851091
• End: 7851195
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7852006
• End: 7852523
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7852580
• End: 7852821
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7852865
• End: 7853674
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7853723
• End: 7853902
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7854299
• End: 7854428
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7854524
• End: 7854709
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7854757
• End: 7855258
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7855305
• End: 7855431
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7855479
• End: 7855597
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7855643
• End: 7855769
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7855816
• End: 7855908
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7855960
• End: 7856034
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7856086
• End: 7856167
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7856215
• End: 7856322
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7856396
• End: 7856473
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7856523
• End: 7856756
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7857325
• End: 7857416
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7857466
• End: 7857700
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7857749
• End: 7857852
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7858270
• End: 7858326
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7860000
• End: 7860081
• Strand: -1

• Feature . Primary Identifier: CDS:C54D2.5a
• Start: 7861164
• End: 7861231
• Strand: -1

1 Sequence

• Length: 5514

1 Sequence Ontology Term

• Name: CDS

3 Transcripts

WormMine ID	Sequence Name	Length (nt)	Chromosome Location
Transcript:C54D2.5a.3	C54D2.5a.3	6133	X: 7847682-7861308
Transcript:C54D2.5a.2	C54D2.5a.2	6218	X: 7847682-7875954
Transcript:C54D2.5a.1	C54D2.5a.1	5919	X: 7847947-7875954