WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK455.7.1 Sequence Name  ZK455.7.1
Length (nt)  3900   Chromosome Location  X: 11352156-11357094
Chromosome . Primary Identifier  X Chromosome Location . Start  11352156
Chromosome Location . End  11357094 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK455.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003997 pgp-3 ZK455.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK455.7 ZK455.7 3807   X: 11352162-11352263

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK455.7.1 11352156 11357094 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon252638   108   X: 11352156-11352263 Caenorhabditis elegans
Exon252639   103   X: 11352319-11352421 Caenorhabditis elegans
Exon252640   143   X: 11352787-11352929 Caenorhabditis elegans
Exon252641   431   X: 11352979-11353409 Caenorhabditis elegans
Exon252642   523   X: 11353458-11353980 Caenorhabditis elegans
Exon252643   204   X: 11354027-11354230 Caenorhabditis elegans
Exon252644   274   X: 11354280-11354553 Caenorhabditis elegans
Exon252645   99   X: 11354597-11354695 Caenorhabditis elegans
Exon252646   230   X: 11354835-11355064 Caenorhabditis elegans
Exon252647   258   X: 11355117-11355374 Caenorhabditis elegans
Exon252648   545   X: 11355422-11355966 Caenorhabditis elegans
Exon252649   639   X: 11356064-11356702 Caenorhabditis elegans
Exon252650   343   X: 11356752-11357094 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK455.7.1 11352156 11357094 1

1 Sequence

Length
3900

1 Sequence Ontology Term

Identifier Name Description
transcript