WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C40C9.5c Sequence Name  C40C9.5c
Length (nt)  2385   Chromosome Location  X: 13626618-13626761
Chromosome . Primary Identifier  X Chromosome Location . Start  13626618
Chromosome Location . End  13626761
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C40C9.5c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53235 NLG-1, isoform c 89.1 794 Caenorhabditis elegans
 

Other

6 RNAi

WormBase ID
WBRNAi00042252
WBRNAi00011813
WBRNAi00029704
WBRNAi00080989
WBRNAi00080990
WBRNAi00111983

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C40C9.5c 13626618 13626761 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006412 nlg-1 C40C9.5 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:C40C9.5c 13626618 13626761 -1
CDS:C40C9.5c 13626916 13627020 -1
CDS:C40C9.5c 13627183 13627325 -1
CDS:C40C9.5c 13627816 13628076 -1
CDS:C40C9.5c 13628141 13628466 -1
CDS:C40C9.5c 13628518 13628645 -1
CDS:C40C9.5c 13628809 13629060 -1
CDS:C40C9.5c 13629342 13629497 -1
CDS:C40C9.5c 13629607 13629776 -1
CDS:C40C9.5c 13630061 13630192 -1
CDS:C40C9.5c 13630241 13630515 -1
CDS:C40C9.5c 13630560 13630672 -1
CDS:C40C9.5c 13630820 13630952 -1
CDS:C40C9.5c 13631049 13631095 -1

1 Sequence

Length
2385

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C40C9.5c.1 C40C9.5c.1 2854   X: 13626149-13631095