WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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CDS :

WormMine ID  CDS:F18A1.3d Sequence Name  F18A1.3d
Length (nt)  903   Chromosome Location  II: 7672043-7672108
Chromosome . Primary Identifier  II Chromosome Location . Start  7672043
Chromosome Location . End  7672108
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F18A1.3d

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE37001 LIR-1, isoform d 34.2 300 Caenorhabditis elegans
 

Other

24 RNAi

WormBase ID
WBRNAi00116181
WBRNAi00116183
WBRNAi00044908
WBRNAi00008657
WBRNAi00066784
WBRNAi00064890
WBRNAi00068456
WBRNAi00068457
WBRNAi00068458
WBRNAi00068459
WBRNAi00068460
WBRNAi00024306
WBRNAi00116178
WBRNAi00116185
WBRNAi00116187
WBRNAi00116189
WBRNAi00064775
WBRNAi00068908
WBRNAi00025131
WBRNAi00073031
WBRNAi00073033
WBRNAi00073032
WBRNAi00064723
WBRNAi00092023

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F18A1.3d 7672043 7672108 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003044 lir-1 F18A1.3 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F18A1.3d 7672043 7672108 1
CDS:F18A1.3d 7681051 7681326 1
CDS:F18A1.3d 7681486 7681895 1
CDS:F18A1.3d 7681945 7682079 1
CDS:F18A1.3d 7682125 7682140 1

1 Sequence

Length
903

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F18A1.3d.1 F18A1.3d.1 1155   II: 7672010-7682359