WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F49E11.1k Sequence Name  F49E11.1k
Length (nt)  2340   Chromosome Location  IV: 13009158-13009229
Chromosome . Primary Identifier  IV Chromosome Location . Start  13009158
Chromosome Location . End  13009229
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F49E11.1k

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE49822 MBK-2, isoform k 85.6 779 Caenorhabditis elegans
 

Other

38 RNAi

WormBase ID
WBRNAi00114295
WBRNAi00114060
WBRNAi00114139
WBRNAi00063419
WBRNAi00007724
WBRNAi00022901
WBRNAi00101306
WBRNAi00015306
WBRNAi00063574
WBRNAi00103776
WBRNAi00103777
WBRNAi00063707
WBRNAi00063567
WBRNAi00077946
WBRNAi00063568
WBRNAi00114218
WBRNAi00114254
WBRNAi00114098
WBRNAi00063427
WBRNAi00063426
WBRNAi00108300
WBRNAi00063428
WBRNAi00063572
WBRNAi00063429
WBRNAi00063430
WBRNAi00063575
WBRNAi00063710
WBRNAi00032530
WBRNAi00047840
WBRNAi00086498

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F49E11.1k 13009158 13009229 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003150 mbk-2 F49E11.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:F49E11.1k 13009158 13009229 1
CDS:F49E11.1k 13009460 13009515 1
CDS:F49E11.1k 13014614 13014824 1
CDS:F49E11.1k 13014899 13015001 1
CDS:F49E11.1k 13015053 13015115 1
CDS:F49E11.1k 13023834 13024054 1
CDS:F49E11.1k 13024465 13024618 1
CDS:F49E11.1k 13031594 13031768 1
CDS:F49E11.1k 13032540 13032855 1
CDS:F49E11.1k 13032912 13033175 1
CDS:F49E11.1k 13033229 13033930 1
CDS:F49E11.1k 13034824 13034826 1

1 Sequence

Length
2340

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49E11.1k.1 F49E11.1k.1 3317   IV: 13009158-13035803