WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00003150 Gene Name  mbk-2
Sequence Name  ? F49E11.1 Brief Description  mbk-2 encodes one of two C. elegans members of the DYRK (dual-specificity Yak1-related kinase) family of proteins that includes S. cerevisiae Yak1 and the Drosophila minibrain and DYRK2 kinases; MBK-2 activity is required maternally for the oocyte-to-egg transition that occurs during the earliest stages of embryonic development; specifically, MBK-2 is required for: 1) posterior localization of the germ plasm components PIE-1, POS-1, and PGL-1, and 2) post-fertilization degradation of a subset of maternal proteins including the MEI-1 and MEI-2 meiosis-specific katanin subunits, the OMA-1 oocyte maturation factor, and residual PIE-1 that remains anteriorly localized after its normal posterior segregation; MBK-2 also primes the MEX-5 polarity protein for subsequent phosphorylation by the polo-like kinase PLK-1; genetic analyses suggest that, in regulating the segregation and degradation of maternal proteins, MBK-2 lies downstream of the initial embryonic polarity cues established by the PAR and MEX proteins; MBK-2 activity depends upon progression through the meiotic divisions and is positively regulated by CDK-1 and negatively regulated by EGG-3 and EGG-4/5; MBK-2 physically interacts with EGG-3 and EGG-4, suggesting that regulation by EGG-3 and EGG-4 is direct; MBK-2 is expressed uniformly in the cortex of oocytes and newly fertilized zygotes; in later stage zygotes, just prior to the second meiotic division, MBK-2 becomes localized to discrete cortical foci, and by the first mitosis it is found predominantly on centrosomes and chromosomes; MBK-2 is also associated with P granules in the germline blastomeres P2, P3, and P4.
Organism  Caenorhabditis elegans Automated Description  Enables protein serine/threonine kinase activity and protein tyrosine kinase activity. Involved in several processes, including P granule disassembly; asymmetric protein localization involved in cell fate determination; and positive regulation of proteasomal ubiquitin-dependent protein catabolic process. Located in cell cortex and intracellular non-membrane-bounded organelle. Expressed in several structures, including body wall musculature; embryonic cell; gonad; oocyte; and pharynx. Used to study Down syndrome. Is an ortholog of human DYRK2 (dual specificity tyrosine phosphorylation regulated kinase 2) and DYRK3 (dual specificity tyrosine phosphorylation regulated kinase 3).
Biotype  SO:0001217 Genetic Position  IV :6.86808 ±0.065322
Length (nt)  ? 26804
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00003150

Genomics

14 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F49E11.1c.1 F49E11.1c.1 3520   IV: 13009158-13035955
Transcript:F49E11.1b.1 F49E11.1b.1 3594   IV: 13009158-13035953
Transcript:F49E11.1k.1 F49E11.1k.1 3317   IV: 13009158-13035803
Transcript:F49E11.1g.1 F49E11.1g.1 2403   IV: 13009158-13034518
Transcript:F49E11.1h.1 F49E11.1h.1 1608   IV: 13024534-13034518
Transcript:F49E11.1l.1 F49E11.1l.1 1545   IV: 13024534-13034826
Transcript:F49E11.1e.1 F49E11.1e.1 1721   IV: 13026206-13033951
Transcript:F49E11.1f.1 F49E11.1f.1 3620   IV: 13027172-13035961
Transcript:F49E11.1i.1 F49E11.1i.1 1572   IV: 13031334-13034518
Transcript:F49E11.1m.1 F49E11.1m.1 1509   IV: 13031334-13034826
Transcript:F49E11.1a.1 F49E11.1a.1 3232   IV: 13031334-13035951
Transcript:F49E11.1d.1 F49E11.1d.1 1428   IV: 13031644-13033951
Transcript:F49E11.1j.1 F49E11.1j.1 1473   IV: 13031644-13034518
Transcript:F49E11.1n.1 F49E11.1n.1 1410   IV: 13031644-13034826
 

Other

14 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F49E11.1b F49E11.1b 2454   IV: 13009158-13009229
CDS:F49E11.1c F49E11.1c 2391   IV: 13009158-13009229
CDS:F49E11.1g F49E11.1g 2403   IV: 13009158-13009229
CDS:F49E11.1k F49E11.1k 2340   IV: 13009158-13009229
CDS:F49E11.1h F49E11.1h 1608   IV: 13024534-13024618
CDS:F49E11.1l F49E11.1l 1545   IV: 13024534-13024618
CDS:F49E11.1e F49E11.1e 1506   IV: 13026421-13026448
CDS:F49E11.1i F49E11.1i 1572   IV: 13031334-13031382
CDS:F49E11.1m F49E11.1m 1509   IV: 13031334-13031382
CDS:F49E11.1d F49E11.1d 1428   IV: 13031644-13031768
CDS:F49E11.1n F49E11.1n 1410   IV: 13031644-13031768
CDS:F49E11.1a F49E11.1a 1527   IV: 13031334-13031382
CDS:F49E11.1f F49E11.1f 1518   IV: 13027264-13027303
CDS:F49E11.1j F49E11.1j 1473   IV: 13031644-13031768

38 RNAi Result

WormBase ID
WBRNAi00114295
WBRNAi00114060
WBRNAi00114139
WBRNAi00063419
WBRNAi00007724
WBRNAi00022901
WBRNAi00101306
WBRNAi00015306
WBRNAi00063574
WBRNAi00103776
WBRNAi00103777
WBRNAi00063707
WBRNAi00063567
WBRNAi00077946
WBRNAi00063568
WBRNAi00114218
WBRNAi00114254
WBRNAi00114098
WBRNAi00063427
WBRNAi00063426
WBRNAi00108300
WBRNAi00063428
WBRNAi00063572
WBRNAi00063429
WBRNAi00063430
WBRNAi00063575
WBRNAi00063710
WBRNAi00032530
WBRNAi00047840
WBRNAi00086498

429 Allele

Public Name
otn10062
gk964278
gk964078
gk963546
gk963547
gk964500
gk962765
gk432705
gk372194
gk684528
gk427829
gk592212
gk747005
gk535183
gk736677
gk474293
gk821759
gk809201
gk768157
gk842961
gk566518
gk491606
gk768158
gk552178
gk693064
gk322979
gk882995
gk656852
gk483068
gk858705

1 Chromosome

WormBase ID Organism Length (nt)
IV Caenorhabditis elegans 17493829  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00003150 13009158 13035961 1

4 Data Sets

Name URL
WormBaseAcedbConverter  
GO Annotation data set  
C. elegans genomic annotations (GFF3 Gene)  
Panther orthologue and paralogue predictions  

0 Downstream Intergenic Region

156 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genes with expression altered >= 3-fold in dpy-10(e128) mutants. Data across the wild type series was analyzed using the Significance analysis of Microarrays (SAM) algorithm (to calculate the False Discovery Rate (FDR)). WBPaper00035873:dpy-10_regulated
  Transcripts that showed significantly increased expression in L1 neural cells comparing to in adult neural cells. DESeq2 (v1.18.1) fold change > 2, P-adj<0.05, using BenjaminiHochberg correction. WBPaper00060811:L1_vs_adult_upregulated_neural
  Transcripts expressed in neuronal cells, by analyzingfluorescence-activated cell sorted (FACS) neurons. DESeq. False discovry rate (FDR) < 0.1. WBPaper00048988:neuron_expressed
  Genes that showed expression levels higher than the corresponding reference sample (embryonic 24hr reference). A Mann-Whitney U test with an empirical background model and FDR correction for multiple testing was used to detect expressed transcripts (Benjamini and Hochberg 1995). Genes and TARs with an FDR <= 0.05 were reported as expressed above background. Authors detected differentially expressed transcripts using a method based on linear models. Genes and TARs were called differentially expressed if the FDR was <= 0.05 and the fold change (FC) >= 2.0. To more strictly correct for potential false-positives resulting from multiple sample comparisons, authors divided individual FDR estimates by the number of samplesor sample comparisons, respectively. This resulted in an adjusted FDR of 1.3 * 0.0001 for expression above background and of 7.4 * 0.0001 for differential expression. Authors called genes selectively enriched in a given tissue if they met the following requirements: (1) enriched expression in a given tissue (FDR <= 0.05 and FC >= 2.0), (2) fold change versus reference among the upper 40% of the positive FC range observed for this gene across all tissues, and (3) fold-change entropy among the lower 40% of the distribution observed for all genes. WBPaper00037950:all-neurons_L1-larva_expressed
  mRNAs that showed decreased expression in 1 cell mebryo comparing to in oocyte, according to RNAseq analysis. Gaussian error propagation. As cutoff for the up-regulated genes authors used log2 fold change > 1 and P < 0.05 and as cutoff for the down-regulated genes authors used log2 fold change < -1 and P < 0.05. WBPaper00045420:fertilization_downregulated_transcript
Osmotic stress Transcripts that showed significantly altered expression with 500 mM salt (NaCl) vs 100 mM salt when food was present DESeq(version 1.10.1), FDR < 0.05. WBPaper00050726:OsmoticStress_regulated_Food
Bacteria: E.faecalis strain OG1RF Transcripts that showed significantly increased expression after infection by E. faecalis OG1RF. Ballgown was used to calculate differential expression of genes using FPKM data and to generate tables with fold change and P values. Genes were shortlisted with a cutoff of 2-fold change and P values of less than 0.05. WBPaper00059754:E.faecalis_OG1RF_upregulated
  Proteins interacting with NHR-49-GFP according to co-IP and LC-MS. N.A. WBPaper00064071:NHR-49_interacting
  Transcripts expressed in the epithelial tissues surrounding the pharynx that includes the arcade and intestinal valve (AIV) cells, according to PAT-Seq analysis using Pbath-15-GFP-3XFLAG mRNA tagging. Cufflinks FPKM value >=1. WBPaper00050990:arcade_intestinal-valve_expressed
  Transcripts expressed in body muscle, according to PAT-Seq analysis using Pmyo-3-GFP-3XFLAG mRNA tagging. Cufflinks FPKM value >=1. WBPaper00050990:body-muscle_expressed
  Transcripts expressed in GABAergic neuron, according to PAT-Seq analysis using Punc-47-GFP-3XFLAG mRNA tagging. Cufflinks FPKM value >=1. WBPaper00050990:GABAergic-neuron_expressed
  Transcripts expressed in hypodermis, according to PAT-Seq analysis using Pdpy-7-GFP-3XFLAG mRNA tagging. Cufflinks FPKM value >=1. WBPaper00050990:hypodermis_expressed
  Transcripts expressed in intestine, according to PAT-Seq analysis using Pges-1-GFP-3XFLAG mRNA tagging. Cufflinks FPKM value >=1. WBPaper00050990:intestine_expressed
  Transcripts expressed in NMDA neuron, according to PAT-Seq analysis using Pnmr-1-GFP-3XFLAG mRNA tagging. Cufflinks FPKM value >=1. WBPaper00050990:NMDA-neuron_expressed
  Transcripts expressed in pharynx, according to PAT-Seq analysis using Pmyo-2-GFP-3XFLAG mRNA tagging. Cufflinks FPKM value >=1. WBPaper00050990:pharynx_expressed
  Genes with expression level regulated by genotype (N2 vs CB4856) and age at old adults stage (214 hours at 24 centigrade). For model 2, authors used 100 permutations to estimate the FDR threshold. Per permutation, genotypes and ages were independently randomly distributed, keeping the among-gene structure intact. Then for each spot (23,232) on the array, model 2 was tested. The obtained P-values were used to estimate a threshold for each of the explanatory factors. Authors also used a genome-wide threshold of -log10 P-value = 2, which resembles an FDR of 0.072 and 0.060 for marker and the interaction age-marker for the developing worms and FDR of 0.050 and 0.065 for marker and age-marker for the aging worms. For the physiological age effect, authors used a log10 P-value = 8 in developing worms (0.012 FDR) and -log10 P-value = 6 (0.032 FDR). WBPaper00040858:eQTL_age_regulated_aging
  Genes with expression level regulated by genotype (N2 vs CB4856) and age at L3 larva and Late reproduction stage (96 hours at 24 centigrade). For model 2, authors used 100 permutations to estimate the FDR threshold. Per permutation, genotypes and ages were independently randomly distributed, keeping the among-gene structure intact. Then for each spot (23,232) on the array, model 2 was tested. The obtained P-values were used to estimate a threshold for each of the explanatory factors. Authors also used a genome-wide threshold of -log10 P-value = 2, which resembles an FDR of 0.072 and 0.060 for marker and the interaction age-marker for the developing worms and FDR of 0.050 and 0.065 for marker and age-marker for the aging worms. For the physiological age effect, authors used a log10 P-value = 8 in developing worms (0.012 FDR) and -log10 P-value = 6 (0.032 FDR). WBPaper00040858:eQTL_age_regulated_developing
  Transcripts expressed in seam cells, according to PAT-Seq analysis using Pgrd-10-GFP-3XFLAG mRNA tagging. Cufflinks FPKM value >=1. WBPaper00050990:seam_expressed
  Genes with expression level regulated by genotype (N2 vs CB4856) at L3 larva and Late reproduction stage (96 hours at 24 centigrade). For model 2, authors used 100 permutations to estimate the FDR threshold. Per permutation, genotypes and ages were independently randomly distributed, keeping the among-gene structure intact. Then for each spot (23,232) on the array, model 2 was tested. The obtained P-values were used to estimate a threshold for each of the explanatory factors. Authors also used a genome-wide threshold of -log10 P-value = 2, which resembles an FDR of 0.072 and 0.060 for marker and the interaction age-marker for the developing worms and FDR of 0.050 and 0.065 for marker and age-marker for the aging worms. For the physiological age effect, authors used a log10 P-value = 8 in developing worms (0.012 FDR) and -log10 P-value = 6 (0.032 FDR). WBPaper00040858:eQTL_regulated_developing
  Transcripts that showed significantly decreased expression in day 3 adult hermaphrodite comparing to in L4 larva glp-1(e2141) animals. Fold change > 2, FDR < 0.05 WBPaper00064088:Day-3-adult_vs_L4_downregulated_glp-1(e2141)
Bacteria diet: Sphingomonas aquatilis Yellow. Fed for 30 generations. Transcripts that showed significantly decreased expression after fed by bacteria Sphingomonas aquatilis (Yellow) for 30 generations comparing to animals fed by E. coli OP50. DESeq2 fold change > 2, p-value < 0.01. WBPaper00061007:S.aquatilis_downregulated
Bacteria infection: Bacillus thuringiensis mRNAs that showed significantly decreased expression after pathogenic bacteria Bacillus thuringiensis infections comparing to non pathogenic BT (BT247(1 to 2 mix) vs BT407 12h), according to RNAseq. Cuffdiff, ajusted p-value < 0.01. WBPaper00046497:B.thuringiensis_0.5mix_downregulated_12h
Bacteria infection: Staphylococcus aureus MW2. 4 hours of exposure. Transcripts that showed significantly increased expression after N2 animals had 4 hours of infection by Staphylococcus aureus (MW2). DEseq 1.18.0, adjusted p-value < 0.05. WBPaper00056471:S.aureus-4h_upregulated_N2
  Transcripts that showed significantly changed expression in 6-day post-L4 adult hermaphrodite comparing to in 1-day post L4 adult hermaphrodite animals. Sleuth WBPaper00051558:aging_regulated
  Transcripts that showed significantly increased expression in 10-days post L4 adult hermaphrodite N2 grown at 20C, comparing to in 1-day post L4 adult hermaphrodite N2 animals grown at 20C. CuffDiff, fold change > 2. WBPaper00065096:Day10_vs_Day1_upregulated
  Transcripts detected in body muscle nuclei according to a nuclear FACS-based strategy. Cufflinks WBPaper00065120:body-muscle-transcriptome
  Genes that showed expression levels higher than the corresponding reference sample (L2 all cell reference). A Mann-Whitney U test with an empirical background model and FDR correction for multiple testing was used to detect expressed transcripts (Benjamini and Hochberg 1995). Genes and TARs with an FDR <= 0.05 were reported as expressed above background. Authors detected differentially expressed transcripts using a method based on linear models. Genes and TARs were called differentially expressed if the FDR was <= 0.05 and the fold change (FC) >= 2.0. To more strictly correct for potential false-positives resulting from multiple sample comparisons, authors divided individual FDR estimates by the number of samplesor sample comparisons, respectively. This resulted in an adjusted FDR of 1.3 * 0.0001 for expression above background and of 7.4 * 0.0001 for differential expression. Authors called genes selectively enriched in a given tissue if they met the following requirements: (1) enriched expression in a given tissue (FDR <= 0.05 and FC >= 2.0), (2) fold change versus reference among the upper 40% of the positive FC range observed for this gene across all tissues, and (3) fold-change entropy among the lower 40% of the distribution observed for all genes. WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
  Transcripts that showed significantly decreased expression in tetraploid N2 comparing to diploid N2 animals at L4 larva stage. DESeq2 R package (1.20.0), fold change > 2, and FDR < 0.05. WBPaper00066110:tetraploid_vs_diploid_downregulated
  Proteins that showed significantly decreased expression after 1-day-old wild type adults were exposed to cisplatin (300ug per mL) for 6 hours. The differential expression analysis was performed in R. Differentially expressed proteins were identified by using a two-sided t-test on log-transformed data. WBPaper00065373:Cisplatin_downregulated_WT
  Genes that showed expression levels higher than the corresponding reference sample (L3/L4 all cell reference). A Mann-Whitney U test with an empirical background model and FDR correction for multiple testing was used to detect expressed transcripts (Benjamini and Hochberg 1995). Genes and TARs with an FDR <= 0.05 were reported as expressed above background. Authors detected differentially expressed transcripts using a method based on linear models. Genes and TARs were called differentially expressed if the FDR was <= 0.05 and the fold change (FC) >= 2.0. To more strictly correct for potential false-positives resulting from multiple sample comparisons, authors divided individual FDR estimates by the number of samplesor sample comparisons, respectively. This resulted in an adjusted FDR of 1.3 * 0.0001 for expression above background and of 7.4 * 0.0001 for differential expression. Authors called genes selectively enriched in a given tissue if they met the following requirements: (1) enriched expression in a given tissue (FDR <= 0.05 and FC >= 2.0), (2) fold change versus reference among the upper 40% of the positive FC range observed for this gene across all tissues, and (3) fold-change entropy among the lower 40% of the distribution observed for all genes. WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed

13 Expression Patterns

Remark Reporter Gene Primary Identifier Pattern Subcellular Localization
Picture: Fig 2.   Expr4905   Endogenous MBK-2 and EGG-3 colocalize on the cortex of growing oocytes. Two MBK-2 fusions (GFP:MBK-2 and MBK-2:HIS) colocalize with endogenous EGG-3 on the cortex in metaphase I embryos and in discrete cytoplasmic puncta during the second meiotic division. In 2-cell and later embryos, EGG-3 was rarely detected, whereas GFP:MBK-2 and endogenous MBK-2 persisted in the cytoplasm of all blastomeres and on P granules until at least the 20-cell stage. Comparison of total EGG-3 levels to cytoplasmic GFP:MBK-2 levels confirmed that degradation of EGG-3 correlates with increased GFP:MBK-2 in the cytoplasm.
    Expr4577   WGA-G and MBK-2 colocalized in the cortex of oocytes in the proximal germline and in the cortex of newly fertilized embryos. Furthermore, cortical WGA-G and MBK-2 punctae were completely coincident at anaphase of meiosis I. MBK-2 localizes to centrosomes and chromosomes by first mitosis, at which point, WGA-G punctae are no longer detected.
    Expr1031486 Tiling arrays expression graphs  
    Expr2388 mbk-2::gfp reporter constructs were expressed in subsets of tissues, including the nervous system, body wall muscle, and the pharynx.  
    Expr1151671 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/hashimshony2015  
    Expr12976 mbk-2 showed strong expression in the syncytial region of the gonad and in embryos, the reporter showed a complete lack of expression in oocytes.  
    Expr2013432 Single cell embryonic expression. Only cell types with an expression fraction of greater 0.2 of the maximum expressed fraction are labeled (Full data can be downloaded from http://caltech.wormbase.org/pub/wormbase/datasets-published/packer2019/). The colors represent the broad cell class to which the cell type has been assigned. The size of the point is proportional to the log2 of the numbers of cells in the dataset of that cell type. Interactive visualizations are available as a web app (https://cello.shinyapps.io/celegans/) and can also be installed as an R package (https://github.com/qinzhu/VisCello.celegans).  
    Expr2389   MBK-2::GFP was excluded from the nucleus.
    Expr3804   GFP:MBK-2 relocalizes abruptly from the cortex to cortical puncta in anaphase/telophase of meiosis I and progressively from cortical puncta to the cytoplasm during meiosis II and meiotic exit. Consistent with two distinct steps of relocalization, embryos arrested before or during metaphase I maintain GFP:MBK-2 uniformly at the cortex, whereas embryos arrested in metaphase II maintain GFP:MBK-2 in cortical puncta, with some puncta in the cytoplasm (20/24 zyg-11(RNAi) gonads). In spe-9 eggs, GFP:MBK-2 progressed from the cortex into cortical puncta and the cytoplasm as in wild-type embryos, suggesting that meiotic exit, rather than meiosis II, is critical. In wee-1.3(RNAi) oocytes, relocalization of GFP:MBK-2 to cortical puncta and to the cytoplasm occurred precociously in oocytes . This premature relocalization was blocked by CDK-1 and MAT-1 depletion. Authors concluded that GFP:MBK-2 relocalizes from the cortex to the cytoplasm in a two-step process linked to progression past metaphase I and possibly to meiotic exit.
    Expr2031666 Single cell embryonic expression. Only cell types with an expression fraction of greater 0.2 of the maximum expressed fraction are labeled (Full data can be downloaded from http://caltech.wormbase.org/pub/wormbase/datasets-published/packer2019/). The colors represent the broad cell class to which the cell type has been assigned. The size of the point is proportional to the log2 of the numbers of cells in the dataset of that cell type. Interactive visualizations are available as a web app (https://cello.shinyapps.io/celegans/) and can also be installed as an R package (https://github.com/qinzhu/VisCello.celegans).  
    Expr2692   GFP:MBK-2 foci was detected in 0/9 embryos undergoing metaphase or anaphase of meiosis I, in 3/4 embryos in telophase of meiosis I or prophase of meiosis II, and in 18/18 embryos in metaphase or anaphase of meiosis II. After pronuclear formation, the foci disappeared quickly in a posterior-to-anterior wave. GFP:Histone H2B fusion was used to precisely stage embryos expressing GFP:MBK-2. GFP:MBK-2 was found predominantly at the cell periphery (cortex) in a uniform pattern. In later zygotes, GFP:MBK-2 distribution changed abruptly from uniform to punctate, with GFP:MBK-2 apparently coalescing into many discrete cortical foci. By mitosis, GFP:MBK-2 was found predominantly on centrosomes and chromosomes, in a pattern that persisted in all blastomeres up to at least the eight-cell stage. In the germline blastomeres P2, P3, and P4, GFP:MBK-2 also appeared to associate with P granules. Seventy-eight percent of mat-1(RNAi) embryos (n=292) maintained GFP:MBK-2 uniformly distributed at the cortex, as it is in oocytes and newly fertilized zygotes. The remainder typically had fewer foci than wild-type. mat-1 encodes CDC27, an APC subunit required for the metaphase-to-anaphase transition. Thus, redistribution of MBK-2 into cortical foci occurs just prior to the second meiotic division, and depends on progression past metaphase of meiosis I.
    Expr3274   In fertilized embryos, GFP-MBK-2 foci were first observed on the cortex at 4.3 +/- 0.7 min (n = 4) after the start of anaphase I chromosome segregation. The appearance of cortical foci of GFP-MBK-2 in unfertilized, spe-9 embryos was delayed until 12.3 +/- 2.1 min (n = 3) after the start of anaphase I chromosome separation. The timing of GFP-MBK-2 redistribution was also measured in fertilized and unfertilized embryos expressing only GFP-MBK-2 and using exit from the spermatheca as a reference point. In these experiments, cortical foci of GFP-MBK-2 appeared 13.7 +/- 1.9 min (n = 9) after spermatheca exit in fertilized embryos and 22.4 +/- 3.0 min (n = 8) after spermatheca exit in unfertilized embryos. These results indicate that the redistribution of GFP-MBK-2 was delayed by approximately 9 min in the absence of fertilization.
    Expr1018585 Developmental gene expression time-course. Raw data can be downloaded from ftp://caltech.wormbase.org/pub/wormbase/datasets-published/levin2012  

47 GO Annotation

Annotation Extension Qualifier
  located_in
  located_in
  located_in
  located_in
  located_in
  located_in
  enables
  enables
  enables
has_input(WB:WBGene00003864)|has_input(WB:WBGene00003183) enables
  enables
  enables
  enables
has_input(WB:WBGene00003183) enables
  enables
  enables
  enables
  enables
occurs_in(GO:0005737)|occurs_in(GO:0005938) enables
  enables
occurs_in(GO:0005737)|occurs_in(GO:0005938) enables
  enables
  enables
  enables
  involved_in
  enables
  enables
  enables
  enables
  enables

8 Homologues

Type
orthologue
orthologue
orthologue
orthologue
least diverged orthologue
least diverged orthologue
least diverged orthologue
least diverged orthologue

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00003150 13009158 13035961 1

47 Ontology Annotations

Annotation Extension Qualifier
  located_in
  located_in
  located_in
  located_in
  located_in
  located_in
  enables
  enables
  enables
has_input(WB:WBGene00003864)|has_input(WB:WBGene00003183) enables
  enables
  enables
  enables
has_input(WB:WBGene00003183) enables
  enables
  enables
  enables
  enables
occurs_in(GO:0005737)|occurs_in(GO:0005938) enables
  enables
occurs_in(GO:0005737)|occurs_in(GO:0005938) enables
  enables
  enables
  enables
  involved_in
  enables
  enables
  enables
  enables
  enables

0 Regulates Expr Cluster

1 Sequence

Length
26804

1 Sequence Ontology Term