WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11A1.3e.1 Sequence Name  F11A1.3e.1
Length (nt)  3636   Chromosome Location  X: 10644409-10666872
Chromosome . Primary Identifier  X Chromosome Location . Start  10644409
Chromosome Location . End  10666872 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11A1.3e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000908 daf-12 F11A1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11A1.3e F11A1.3e 2037   X: 10660802-10660868

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F11A1.3e.1 10644409 10666872 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249678   142   X: 10644409-10644550 Caenorhabditis elegans
Exon249681   60   X: 10645838-10645897 Caenorhabditis elegans
Exon249693   73   X: 10660796-10660868 Caenorhabditis elegans
Exon249704   83   X: 10661303-10661385 Caenorhabditis elegans
Exon249713   123   X: 10661433-10661555 Caenorhabditis elegans
Exon249722   267   X: 10661601-10661867 Caenorhabditis elegans
Exon249731   48   X: 10661934-10661981 Caenorhabditis elegans
Exon249740   72   X: 10662030-10662101 Caenorhabditis elegans
Exon249749   96   X: 10662795-10662890 Caenorhabditis elegans
Exon249758   75   X: 10663250-10663324 Caenorhabditis elegans
Exon249767   98   X: 10663660-10663757 Caenorhabditis elegans
Exon249773   107   X: 10663807-10663913 Caenorhabditis elegans
Exon249782   197   X: 10663962-10664158 Caenorhabditis elegans
Exon249791   180   X: 10664406-10664585 Caenorhabditis elegans
Exon249802   293   X: 10664630-10664922 Caenorhabditis elegans
Exon249812   162   X: 10664970-10665131 Caenorhabditis elegans
Exon249822   76   X: 10665178-10665253 Caenorhabditis elegans
Exon249833   1484   X: 10665389-10666872 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F11A1.3e.1 10644409 10666872 1

1 Sequence

Length
3636

1 Sequence Ontology Term

Identifier Name Description
transcript