WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11A1.3e.4 Sequence Name  F11A1.3e.4
Length (nt)  3592   Chromosome Location  X: 10647057-10666875
Chromosome . Primary Identifier  X Chromosome Location . Start  10647057
Chromosome Location . End  10666875 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11A1.3e.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000908 daf-12 F11A1.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11A1.3e F11A1.3e 2037   X: 10660802-10660868

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F11A1.3e.4 10647057 10666875 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon249684   155   X: 10647057-10647211 Caenorhabditis elegans
Exon249696   73   X: 10660796-10660868 Caenorhabditis elegans
Exon249707   83   X: 10661303-10661385 Caenorhabditis elegans
Exon249716   123   X: 10661433-10661555 Caenorhabditis elegans
Exon249725   267   X: 10661601-10661867 Caenorhabditis elegans
Exon249734   48   X: 10661934-10661981 Caenorhabditis elegans
Exon249743   72   X: 10662030-10662101 Caenorhabditis elegans
Exon249752   96   X: 10662795-10662890 Caenorhabditis elegans
Exon249761   75   X: 10663250-10663324 Caenorhabditis elegans
Exon249770   98   X: 10663660-10663757 Caenorhabditis elegans
Exon249776   107   X: 10663807-10663913 Caenorhabditis elegans
Exon249785   197   X: 10663962-10664158 Caenorhabditis elegans
Exon249794   180   X: 10664406-10664585 Caenorhabditis elegans
Exon249805   293   X: 10664630-10664922 Caenorhabditis elegans
Exon249815   162   X: 10664970-10665131 Caenorhabditis elegans
Exon249825   76   X: 10665178-10665253 Caenorhabditis elegans
Exon249837   1487   X: 10665389-10666875 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F11A1.3e.4 10647057 10666875 1

1 Sequence

Length
3592

1 Sequence Ontology Term

Identifier Name Description
transcript