WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W10G6.2a.2 Sequence Name  W10G6.2a.2
Length (nt)  1543   Chromosome Location  X: 16254842-16260128
Chromosome . Primary Identifier  X Chromosome Location . Start  16254842
Chromosome Location . End  16260128 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10G6.2a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004789 sgk-1 W10G6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10G6.2a W10G6.2a 1362   X: 16255015-16255106

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W10G6.2a.2 16254842 16260128 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263801   265   X: 16254842-16255106 Caenorhabditis elegans
Exon263805   307   X: 16256731-16257037 Caenorhabditis elegans
Exon263808   220   X: 16257457-16257676 Caenorhabditis elegans
Exon263811   113   X: 16257754-16257866 Caenorhabditis elegans
Exon263814   132   X: 16257952-16258083 Caenorhabditis elegans
Exon263817   142   X: 16258138-16258279 Caenorhabditis elegans
Exon263820   84   X: 16258913-16258996 Caenorhabditis elegans
Exon263823   137   X: 16259054-16259190 Caenorhabditis elegans
Exon263826   75   X: 16259238-16259312 Caenorhabditis elegans
Exon263829   68   X: 16260061-16260128 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W10G6.2a.2 16254842 16260128 -1

1 Sequence

Length
1543

1 Sequence Ontology Term

Identifier Name Description
transcript