WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W10G6.2a Sequence Name  W10G6.2a
Length (nt)  1362   Chromosome Location  X: 16255015-16255106
Chromosome . Primary Identifier  X Chromosome Location . Start  16255015
Chromosome Location . End  16255106
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10G6.2a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE39527 SGK-1, isoform a 53.1 453 Caenorhabditis elegans
 

Other

44 RNAi

WormBase ID
WBRNAi00087402
WBRNAi00087404
WBRNAi00087405
WBRNAi00055113
WBRNAi00036444
WBRNAi00038557
WBRNAi00038558
WBRNAi00038559
WBRNAi00038560
WBRNAi00038561
WBRNAi00038563
WBRNAi00088028
WBRNAi00088027
WBRNAi00098388
WBRNAi00098390
WBRNAi00098389
WBRNAi00098391
WBRNAi00078071
WBRNAi00087416
WBRNAi00108285
WBRNAi00087417
WBRNAi00087418
WBRNAi00087391
WBRNAi00087392
WBRNAi00087394
WBRNAi00087395
WBRNAi00087398
WBRNAi00087399
WBRNAi00087380
WBRNAi00087382

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W10G6.2a 16255015 16255106 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004789 sgk-1 W10G6.2 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:W10G6.2a 16255015 16255106 -1
CDS:W10G6.2a 16256731 16257037 -1
CDS:W10G6.2a 16257457 16257676 -1
CDS:W10G6.2a 16257754 16257866 -1
CDS:W10G6.2a 16257952 16258083 -1
CDS:W10G6.2a 16258138 16258279 -1
CDS:W10G6.2a 16258913 16258996 -1
CDS:W10G6.2a 16259054 16259190 -1
CDS:W10G6.2a 16259238 16259312 -1
CDS:W10G6.2a 16260061 16260120 -1

1 Sequence

Length
1362

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W10G6.2a.2 W10G6.2a.2 1543   X: 16254842-16260128
Transcript:W10G6.2a.1 W10G6.2a.1 1635   X: 16254843-16262122