WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  In worms expressing cbs-1::GFP, the GFP signal was observed in the hypodermis, intestine, body wall muscle cells and pharyngeal muscles pm3, pm4, pm5, pm6, pm7, and pm8 in all larval stages as well as in adults. We did not observe a GFP signal in embryos, although previous transcriptional screens and peptide mapping studies have reported expression of cbs-1 in this developmental stage. Primary Identifier  Expr9921
Subcellular Localization  The observed GFP signal was distributed diffusely within cells and spared the nucleus, suggesting that CBS-1 is localized in the cytoplasm.

9 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
Longitudinal bands of muscle cells surrounding animal body, with one band running in each quadrant of the body, regulated contraction and relaxation of these muscles cause locomotion. body wall musculature body muscle WBbt:0005813
Epidermal layer. hypodermis epidermis WBbt:0005733
seventh pharyngeal muscle cell layer pm7 m7 WBbt:0003721
eighth pharyngeal muscle cell layer (single cell) pm8 lineage name: MSaaapapp WBbt:0004302
third pharyngeal muscle cell layer pm3 M3 WBbt:0003740
fifth pharyngeal muscle cell layer pm5 M5 WBbt:0003737
fourth pharyngeal muscle cell layer pm4 M4 WBbt:0003739
sixth pharyngeal muscle cell layer pm6 m6 WBbt:0003724

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013866 cbs-1 ZC373.1 Caenorhabditis elegans

5 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024