WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Adult Expression: pharynx; intestine; rectal gland cells; head mesodermal cell; Nervous System; head neurons; neurons along body; PVT interneuron; Embryo Expression: intestine; Larval Expression: pharynx; intestine; rectal gland cells; head mesodermal cell; Nervous System; head neurons; neurons along body; PVT interneuron; Primary Identifier  Expr6177
Remark  Also expressed in (comments from author) : No comments. Strain: BC11202 Reporter Gene  [alh-1::gfp] transcriptional fusion. PCR products were amplified using primer A: 5' [AGCCGAAGTGGATTTTGTTCT] 3' and primer B 5' [GAGAGCTGAACGGAGGATTC] 3'.

8 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
Complement of nervous tissue (neurones, nerves, receptors and support cells) serving to detect, relay and coordinate information about an animal`s internal and external environments and to initiate and integrate its effector responses and activities. nervous system   WBbt:0005735
the feeding organ, a neuro-muscular pump in the head of the animal, used to ingest food, bacteria suspended in liquid, filter them out, grind them up and transport posteriorly into the instestine. pharynx esophagus WBbt:0003681
neuron with its cell body situated in the head, excluding the pharynx. head neuron   WBbt:0006751
Neuron class of one interneuron, projects along ventral cord to ring. PVT lineage name: ABplpappppa WBbt:0004070
Major cell type of nervous tissue, specialized for transmission of information in the form of patterns of impulses. neuron neurone WBbt:0003679
  rectal gland cell   WBbt:0005799
Head mesodermal cell, function unknown head mesodermal cell hmc WBbt:0004697

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000107 alh-1 F54D8.3 Caenorhabditis elegans

3 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003
  A developmental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until adulthood. larva Ce WBls:0000023