WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Expression in touch-sensitive neurons, motor neurons, and interneurons which starts in the 2-fold embryo and disappears by L3. Sporadic expression seen in retrovesicular ganglion at L1. Expressed in ALM, PLM and BDU cells at 2-fold embryo, L1 and L2. In AVM, PVM cells at L1 and L2. Expressed in ventral cord motor neurons VA2-VA12, VB1-VB11, AVF cells, and precursors at L1 and L2. Primary Identifier  Expr521
Remark  Transgenic Marker: rol-6(su1006).
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44 Anatomy Terms

Definition Name Synonym Primary Identifier
neuron with cell body associated with the ventral nerve cord. ventral cord neuron ventral cord motoneuron WBbt:0005300
Ventral cord motor neuron, innervates ventral body muscles VB9 lineage name: P8.aaap WBbt:0004627
Ventral cord motor neuron, innervates ventral body muscles VB10 lineage name: P9.aaap WBbt:0004625
Ventral cord motor neuron, innervates ventral body muscles VB11 lineage name: P10.aaap WBbt:0004623
Ventral cord motor neuron, innervates ventral body muscles VB5 lineage name: P4.aaap WBbt:0004637
Ventral cord motor neuron, innervates ventral body muscles VB6 lineage name: P5.aaap WBbt:0004633
Ventral cord motor neuron, innervates ventral body muscles VB7 lineage name: P6.aaap WBbt:0004631
Ventral cord motor neuron, innervates ventral body muscles VB8 lineage name: P7.aaap WBbt:0004629
Ventral cord motor neuron, innervates ventral body muscles, also interneuron in ring VB1 lineage name: P1.aaap WBbt:0004643
Ventral cord motor neuron, innervates ventral body muscles VB2 lineage name: W.aap WBbt:0004641
Ventral cord motor neuron, innervates ventral body muscles VB3 lineage name: P2.aaap WBbt:0004639
Ventral cord motor neuron, innervates ventral body muscles VB4 lineage name: P3.aaap WBbt:0004638
Neuron class of one neuron, posterior ventral microtuble cell, touch receptor. PVM lineage name: QL.paa WBbt:0004086
Anterior lateral microtubule cell, touch receptor ALML lineage name: ABarppaappa WBbt:0003954
Anterior lateral microtubule cell, touch receptor ALMR lineage name: ABarpppappa WBbt:0003953
Neuron class of one sensory neuron, anterior ventral microtubule cell, touch receptor. AVM lineage name: QR.paa WBbt:0003832
Posterior lateral microtubule cell, touch receptor PLML lineage name: ABplapappppaa WBbt:0004104
Posterior lateral microtubule cell, touch receptor PLMR lineage name: ABprapappppaa WBbt:0004103
Neuron, process runs along excretory canal and into ring, unique darkly staining synaptic vesicles BDUL lineage name: ABarppaappp WBbt:0003812
Neuron, process runs along excretory canal and into ring, unique darkly staining synaptic vesicles BDUR lineage name: ABarpppappp WBbt:0003811
Ventral cord motor neuron, innervates ventral body muscles, but also interneuron in preanal ganglion VA12 lineage name: P12.aaaa WBbt:0004645
Interneuron, processes in ventral cord and ring, few synapses, right side AVFR   WBbt:0005658
Interneuron, processes in ventral cord and ring, few synapses, left side AVFL   WBbt:0005657
Ventral cord motor neuron, innervates ventral body muscles VA2 lineage name: P2.aaaa WBbt:0004870
Ventral cord motor neuron, innervates ventral body muscles VA11 lineage name: P11.aaaa WBbt:0004647
Ventral cord motor neuron, innervates ventral body muscles VA10 lineage name: P10.aaaa WBbt:0004649
Ventral cord motor neuron, innervates ventral body muscles VA8 lineage name: P8.aaaa WBbt:0004653
Ventral cord motor neuron, innervates ventral body muscles VA9 lineage name: P9.aaaa WBbt:0004651
Ventral cord motor neuron, innervates ventral body muscles VA6 lineage name: P6.aaaa WBbt:0004862
Ventral cord motor neuron, innervates ventral body muscles VA7 lineage name: P7.aaaa WBbt:0004860

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003909 pag-3 F45B8.4 Caenorhabditis elegans

4 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003
  The C. elegans life stage spanning 460-520min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and double fold. A stage between 1.5-fold embryo and 3-fold embryo. 2-fold embryo Ce WBls:0000019