WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  scVI 0.6.0 Description  Single-cell RNA-Seq cell group 24_1 expressed in muscle.
Primary Identifier  WBPaper00065841:24_1
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6 Anatomy Terms

Definition Name Synonym Primary Identifier
type of cells that make up muscle layers in the pharynx. pharyngeal muscle cell   WBbt:0005451
first layer pharyngeal muscle cell. pm1 M1 WBbt:0003744
third pharyngeal muscle cell layer pm3 M3 WBbt:0003740
fourth pharyngeal muscle cell layer pm4 M4 WBbt:0003739
sixth pharyngeal muscle cell layer pm6 m6 WBbt:0003724
second layer pharyngeal muscle cell. pm2 m2 WBbt:0003742

200 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000061 lgc-11 F48E3.7 Caenorhabditis elegans
WBGene00000285 cal-1 C13C12.1 Caenorhabditis elegans
WBGene00000401 cdh-9 F59C12.1 Caenorhabditis elegans
WBGene00000445 ceh-22 F29F11.5 Caenorhabditis elegans
WBGene00000530 clh-3 E04F6.11 Caenorhabditis elegans
WBGene00000780 cpn-4 F49D11.8 Caenorhabditis elegans
WBGene00001244 elo-6 F41H10.8 Caenorhabditis elegans
WBGene00001377 eya-1 C49A1.4 Caenorhabditis elegans
WBGene00001663 gpa-1 T19C4.6 Caenorhabditis elegans
WBGene00002011 hsp-12.2 C14B9.1 Caenorhabditis elegans
WBGene00002021 hsp-17 F52E1.7 Caenorhabditis elegans
WBGene00002069 ikb-1 C04F12.3 Caenorhabditis elegans
WBGene00002125 inx-3 F22F4.2 Caenorhabditis elegans
WBGene00002252 lat-2 B0286.2 Caenorhabditis elegans
WBGene00002257 lbp-5 W02D3.7 Caenorhabditis elegans
WBGene00002270 lec-7 R07B1.2 Caenorhabditis elegans
WBGene00002348 myo-1 R06C7.10 Caenorhabditis elegans
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans
WBGene00003514 myo-2 T18D3.4 Caenorhabditis elegans
WBGene00003544 nas-25 F46C5.3 Caenorhabditis elegans
WBGene00003589 nex-2 T07C4.9 Caenorhabditis elegans
WBGene00003597 nhl-1 F54G8.4 Caenorhabditis elegans
WBGene00003606 nhr-7 F54D1.4 Caenorhabditis elegans
WBGene00003644 nhr-54 F36D3.2 Caenorhabditis elegans
WBGene00003702 nhr-112 Y70C5C.6 Caenorhabditis elegans
WBGene00003707 nhr-117 F16B4.12 Caenorhabditis elegans
WBGene00004007 pgp-13 F22E10.2 Caenorhabditis elegans
WBGene00004008 pgp-14 F22E10.3 Caenorhabditis elegans
WBGene00004013 pha-4 F38A6.1 Caenorhabditis elegans
WBGene00004122 pqn-35 F35D11.2 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064
  At 20 Centigrade: 5-6 days after L4-adult molt. 8-9 days after first cleavage. 5-days post-L4 adult hermaphrodite Ce WBls:0000068
  At 20 Centigrade: 72-96 hours after L4-adult molt. 6-7 days after first cleavage. 3-days post-L4 adult hermaphrodite Ce WBls:0000066
  At 20 Centigrade: 8-9 days after L4-adult molt. 11-12 days after first cleavage. 8-days post-L4 adult hermaphrodite Ce WBls:0000672
  At 20 Centigrade: 15-16 days after L4-adult molt. 18-19 days after first cleavage. 15-days post-L4 adult hermaphrodite Ce WBls:0000675
  At 20 Centigrade: 11-12 days after L4-adult molt. 14-15 days after first cleavage. 11-days post-L4 adult hermaphrodite Ce WBls:0000797

0 Processes

0 Regulated By Gene

0 Regulated By Molecule