WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 37 expressed in: e1_e3 (pharyngeal epithelium).
Primary Identifier  WBPaper00065623:37

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of seven motoneurons that innervate dorsal muscles and have cell bodies in the ventral cord. DB neuron   WBbt:0005274
Neuron class of twelve motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VA neuron   WBbt:0005339
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
pharyngeal epithelial cell, type 1. e1   WBbt:0003718
pharyngeal epithelial cell, type 3. e3   WBbt:0003714
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004144 srlf-35 R11G11.7 Caenorhabditis elegans
WBGene00008628 ttr-21 F09F3.6 Caenorhabditis elegans
WBGene00011284 ttr-27 R90.2 Caenorhabditis elegans
WBGene00011450 ttr-22 T04H1.3 Caenorhabditis elegans
WBGene00013515 Y73F4A.2 Y73F4A.2 Caenorhabditis elegans
WBGene00015076 spi-2 B0238.12 Caenorhabditis elegans
WBGene00017970 F32A5.4 F32A5.4 Caenorhabditis elegans
WBGene00013516 Y73F4A.3 Y73F4A.3 Caenorhabditis elegans
WBGene00018492 hpo-26 F46E10.11 Caenorhabditis elegans
WBGene00009097 fipr-2 F23H12.9 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule