WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in pharyngeal-intestinal valve according to single cell RNAseq.
Primary Identifier  WBPaper00061340:Pharyngeal_intestinal_valve
Paste the following link
Lists
This ExpressionCluster isn't in any lists. Upload a list.

1 Anatomy Terms

Definition Name Synonym Primary Identifier
A group of six equivalent cells forms a tightly constructed `valve` that links the posterior bulb of the pharynx to the anterior four cells of the intestine. These six cells comprise a small epithelial channel with a cuticular lining in continuity with the pharyngeal cuticle and link the lumen of the pharynx to the large lumen of the anterior intestine. pharyngeal-intestinal valve cardia WBbt:0005767

299 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000037 ace-3 Y48B6A.8 Caenorhabditis elegans
WBGene00000053 acr-14 T05C12.2 Caenorhabditis elegans
WBGene00000237 bam-2 Y71F9AR.1 Caenorhabditis elegans
WBGene00000397 cdh-5 F08B4.2 Caenorhabditis elegans
WBGene00000411 cdl-1 R06F6.1 Caenorhabditis elegans
WBGene00000420 ced-6 F56D2.7 Caenorhabditis elegans
WBGene00000457 ceh-36 C37E2.4 Caenorhabditis elegans
WBGene00000521 cky-1 C15C8.2 Caenorhabditis elegans
WBGene00000858 cwn-2 W01B6.1 Caenorhabditis elegans
WBGene00001045 dnj-27 Y47H9C.5 Caenorhabditis elegans
WBGene00001059 dpf-6 F44B9.1 Caenorhabditis elegans
WBGene00001150 ech-1.1 C29F3.1 Caenorhabditis elegans
WBGene00001193 egl-26 C23H3.1 Caenorhabditis elegans
WBGene00001247 elo-9 Y53F4B.2 Caenorhabditis elegans
WBGene00001345 fos-1 F29G9.4 Caenorhabditis elegans
WBGene00001559 gei-1 F45H7.2 Caenorhabditis elegans
WBGene00001577 gem-4 T12A7.1 Caenorhabditis elegans
WBGene00001637 gly-12 F48E3.1 Caenorhabditis elegans
WBGene00001687 gpn-1 F59D12.4 Caenorhabditis elegans
WBGene00001749 gst-1 R107.7 Caenorhabditis elegans
WBGene00001751 gst-3 K08F4.11 Caenorhabditis elegans
WBGene00001820 ham-1 F53B2.6 Caenorhabditis elegans
WBGene00001853 hil-2 Y73B6BL.9 Caenorhabditis elegans
WBGene00001898 his-24 M163.3 Caenorhabditis elegans
WBGene00001906 his-32 F17E9.10 Caenorhabditis elegans
WBGene00001949 hlh-2 M05B5.5 Caenorhabditis elegans
WBGene00002043 hyl-1 C09G4.1 Caenorhabditis elegans
WBGene00002125 inx-3 F22F4.2 Caenorhabditis elegans
WBGene00002142 inx-20 T23H4.1 Caenorhabditis elegans
WBGene00002174 itx-1 W03D8.6 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule