WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Initially, differentially expressed genes were defined as FPKM R0.3 with a fold change R2 or %0.5. This resulted in 717 transcripts as differentially expressed in the flp-6 mutant. Authors therefore set a stringent criterion of FPKM R5, which reduced the number of differentially expressed transcripts to 239. Description  Transcripts that showed significantly increased expression in flp-6(RNAi) comparing to in control animals.
Primary Identifier  WBPaper00050225:flp-6(RNAi)_upregulated
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0 Anatomy Terms

100 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000366 cbp-1 R10E11.1 Caenorhabditis elegans
WBGene00000783 cpr-3 T10H4.12 Caenorhabditis elegans
WBGene00000962 dhc-1 T21E12.4 Caenorhabditis elegans
WBGene00001263 emb-9 K04H4.1 Caenorhabditis elegans
WBGene00001829 hcp-1 ZK1055.1 Caenorhabditis elegans
WBGene00002055 ifc-1 F37B4.2 Caenorhabditis elegans
WBGene00002090 ins-7 ZK1251.2 Caenorhabditis elegans
WBGene00002173 itr-1 F33D4.2 Caenorhabditis elegans
WBGene00002280 let-2 F01G12.5 Caenorhabditis elegans
WBGene00002637 let-418 F26F12.7 Caenorhabditis elegans
WBGene00003026 lin-41 C12C8.3 Caenorhabditis elegans
WBGene00003228 mex-1 W03C9.7 Caenorhabditis elegans
WBGene00003426 msp-19 F36H12.7 Caenorhabditis elegans
WBGene00003515 myo-3 K12F2.1 Caenorhabditis elegans
WBGene00003777 nmy-2 F20G4.3 Caenorhabditis elegans
WBGene00004111 pqn-21 C37A2.5 Caenorhabditis elegans
WBGene00004147 larp-5 T12F5.5 Caenorhabditis elegans
WBGene00004166 scc-2 Y43H11AL.3 Caenorhabditis elegans
WBGene00004782 set-2 C26E6.9 Caenorhabditis elegans
WBGene00004904 snf-5 Y46G5A.30 Caenorhabditis elegans
WBGene00004969 spe-15 F47G6.4 Caenorhabditis elegans
WBGene00006404 tag-10 C31C9.1 Caenorhabditis elegans
WBGene00006416 sams-5 T13A10.11 Caenorhabditis elegans
WBGene00006789 unc-54 F11C3.3 Caenorhabditis elegans
WBGene00007027 ssl-1 Y111B2A.22 Caenorhabditis elegans
WBGene00007303 rnh-1.3 C04F12.9 Caenorhabditis elegans
WBGene00007307 spch-1 C04G2.8 Caenorhabditis elegans
WBGene00007320 C05B5.2 C05B5.2 Caenorhabditis elegans
WBGene00007605 hrg-7 C15C8.3 Caenorhabditis elegans
WBGene00007613 C15H11.1 C15H11.1 Caenorhabditis elegans

0 Life Stages

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001449 flp-6 F07D3.2 Caenorhabditis elegans

0 Regulated By Molecule