WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  scVI 0.6.0 Description  Single-cell RNA-Seq cell group 30_4 expressed in valve.
Primary Identifier  WBPaper00065841:30_4
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
A group of six equivalent cells forms a tightly constructed `valve` that links the posterior bulb of the pharynx to the anterior four cells of the intestine. These six cells comprise a small epithelial channel with a cuticular lining in continuity with the pharyngeal cuticle and link the lumen of the pharynx to the large lumen of the anterior intestine. pharyngeal-intestinal valve cardia WBbt:0005767

200 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000022 abt-4 Y39D8C.1 Caenorhabditis elegans
WBGene00000393 cdf-1 C15B12.7 Caenorhabditis elegans
WBGene00000522 clc-1 C09F12.1 Caenorhabditis elegans
WBGene00001042 dnj-24 W03A5.7 Caenorhabditis elegans
WBGene00001133 eat-2 Y48B6A.4 Caenorhabditis elegans
WBGene00001247 elo-9 Y53F4B.2 Caenorhabditis elegans
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans
WBGene00001505 fut-1 K08F8.3 Caenorhabditis elegans
WBGene00001754 gst-6 F11G11.3 Caenorhabditis elegans
WBGene00002024 hsp-43 C14F11.5 Caenorhabditis elegans
WBGene00002052 ifa-4 K05B2.3 Caenorhabditis elegans
WBGene00002053 ifb-1 F10C1.2 Caenorhabditis elegans
WBGene00002056 ifc-2 M6.1 Caenorhabditis elegans
WBGene00002142 inx-20 T23H4.1 Caenorhabditis elegans
WBGene00002174 itx-1 W03D8.6 Caenorhabditis elegans
WBGene00002195 kin-9 F08F1.1 Caenorhabditis elegans
WBGene00002269 lec-6 Y55B1AR.1 Caenorhabditis elegans
WBGene00002271 lec-8 R07B1.10 Caenorhabditis elegans
WBGene00002272 lec-9 C16H3.2 Caenorhabditis elegans
WBGene00002273 lec-10 W01A11.4 Caenorhabditis elegans
WBGene00002274 lec-11 F38A5.3 Caenorhabditis elegans
WBGene00003544 nas-25 F46C5.3 Caenorhabditis elegans
WBGene00003846 odd-2 C34H3.2 Caenorhabditis elegans
WBGene00003960 pcs-1 F54D5.1 Caenorhabditis elegans
WBGene00004013 pha-4 F38A6.1 Caenorhabditis elegans
WBGene00004037 plc-2 Y75B12B.6 Caenorhabditis elegans
WBGene00004169 pqn-89 Y73B6BR.1 Caenorhabditis elegans
WBGene00004855 sma-1 R31.1 Caenorhabditis elegans
WBGene00004876 smf-1 K11G12.4 Caenorhabditis elegans
WBGene00004950 sox-3 F40E10.2 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064
  At 20 Centigrade: 5-6 days after L4-adult molt. 8-9 days after first cleavage. 5-days post-L4 adult hermaphrodite Ce WBls:0000068
  At 20 Centigrade: 72-96 hours after L4-adult molt. 6-7 days after first cleavage. 3-days post-L4 adult hermaphrodite Ce WBls:0000066
  At 20 Centigrade: 8-9 days after L4-adult molt. 11-12 days after first cleavage. 8-days post-L4 adult hermaphrodite Ce WBls:0000672
  At 20 Centigrade: 15-16 days after L4-adult molt. 18-19 days after first cleavage. 15-days post-L4 adult hermaphrodite Ce WBls:0000675
  At 20 Centigrade: 11-12 days after L4-adult molt. 14-15 days after first cleavage. 11-days post-L4 adult hermaphrodite Ce WBls:0000797

0 Processes

0 Regulated By Gene

0 Regulated By Molecule