WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 42 expressed in: Unassigned hypodermis/gonadal sheath cells.
Primary Identifier  WBPaper00065623:42

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of seven motoneurons that innervate dorsal muscles and have cell bodies in the ventral cord. DB neuron   WBbt:0005274
Neuron class of twelve motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VA neuron   WBbt:0005339
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
five pairs of thin gonadal sheath cells form a single layer covering the germ line component of each arm, each pair occupying a stereotyped position along the gonad proximal-distal axis. gonadal sheath cell   WBbt:0005828
sheath cell of phasmid sensillum phasmid sheath cell   WBbt:0006755
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000609 col-20 F11G11.11 Caenorhabditis elegans
WBGene00000696 col-122 T05A1.2 Caenorhabditis elegans
WBGene00000698 col-124 C24F3.6 Caenorhabditis elegans
WBGene00000703 col-129 M18.1 Caenorhabditis elegans
WBGene00000712 col-139 F41F3.4 Caenorhabditis elegans
WBGene00000754 col-181 W03G11.1 Caenorhabditis elegans
WBGene00000757 col-184 F15A2.1 Caenorhabditis elegans
WBGene00016638 perm-4 C44B12.5 Caenorhabditis elegans
WBGene00016636 perm-2 C44B12.1 Caenorhabditis elegans
WBGene00020218 T04G9.7 T04G9.7 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule