WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 41 expressed in: Amphid and phasmid sheath.
Primary Identifier  WBPaper00065623:41

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of seven motoneurons that innervate dorsal muscles and have cell bodies in the ventral cord. DB neuron   WBbt:0005274
Neuron class of twelve motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VA neuron   WBbt:0005339
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
sheath cell of amphid sensillum. amphid sheath cell   WBbt:0006754
sheath cell of phasmid sensillum phasmid sheath cell   WBbt:0006755
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001392 far-8 K02F3.3 Caenorhabditis elegans
WBGene00011072 tag-209 R06F6.11 Caenorhabditis elegans
WBGene00009577 F40F8.4 F40F8.4 Caenorhabditis elegans
WBGene00022093 Y69A2AR.22 Y69A2AR.22 Caenorhabditis elegans
WBGene00014091 srlf-32 ZK822.4 Caenorhabditis elegans
WBGene00008554 F07C6.3 F07C6.3 Caenorhabditis elegans
WBGene00020155 spig-11 T02B11.3 Caenorhabditis elegans
WBGene00020589 T19H12.3 T19H12.3 Caenorhabditis elegans
WBGene00016362 spig-10 C33G8.4 Caenorhabditis elegans
WBGene00009995 spig-9 F53F4.13 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule