WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  scVI 0.6.0 Description  Single-cell RNA-Seq cell group 26_1 expressed in pharynx.
Primary Identifier  WBPaper00065841:26_1
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6 Anatomy Terms

Definition Name Synonym Primary Identifier
type of cells that make up muscle layers in the pharynx. pharyngeal muscle cell   WBbt:0005451
cell that makes up epithelium in pharynx. pharyngeal epithelial cell pharyngeal epithelium WBbt:0005459
seventh pharyngeal muscle cell layer pm7 m7 WBbt:0003721
third pharyngeal muscle cell layer pm3 M3 WBbt:0003740
fourth pharyngeal muscle cell layer pm4 M4 WBbt:0003739
second layer pharyngeal muscle cell. pm2 m2 WBbt:0003742

200 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000061 lgc-11 F48E3.7 Caenorhabditis elegans
WBGene00000169 aqp-1 F32A5.5 Caenorhabditis elegans
WBGene00000287 cal-3 M02B7.6 Caenorhabditis elegans
WBGene00000391 cdd-1 C47D2.2 Caenorhabditis elegans
WBGene00000780 cpn-4 F49D11.8 Caenorhabditis elegans
WBGene00000966 dhs-2 F55A12.4 Caenorhabditis elegans
WBGene00000983 dhs-20 F35B12.2 Caenorhabditis elegans
WBGene00001252 elt-4 C39B10.6 Caenorhabditis elegans
WBGene00001768 gst-20 Y48E1B.10 Caenorhabditis elegans
WBGene00001775 gst-27 Y53F4B.30 Caenorhabditis elegans
WBGene00001792 gst-44 F13A7.10 Caenorhabditis elegans
WBGene00002011 hsp-12.2 C14B9.1 Caenorhabditis elegans
WBGene00002021 hsp-17 F52E1.7 Caenorhabditis elegans
WBGene00002050 ifa-1 F38B2.1 Caenorhabditis elegans
WBGene00002053 ifb-1 F10C1.2 Caenorhabditis elegans
WBGene00002056 ifc-2 M6.1 Caenorhabditis elegans
WBGene00002128 inx-6 C36H8.2 Caenorhabditis elegans
WBGene00002195 kin-9 F08F1.1 Caenorhabditis elegans
WBGene00002248 lam-3 T22A3.8 Caenorhabditis elegans
WBGene00002257 lbp-5 W02D3.7 Caenorhabditis elegans
WBGene00002276 lem-3 F42H11.2 Caenorhabditis elegans
WBGene00002348 myo-1 R06C7.10 Caenorhabditis elegans
WBGene00002915 let-805 H19M22.2 Caenorhabditis elegans
WBGene00002992 lin-3 F36H1.4 Caenorhabditis elegans
WBGene00003514 myo-2 T18D3.4 Caenorhabditis elegans
WBGene00003573 ncx-8 C13D9.7 Caenorhabditis elegans
WBGene00003574 ncx-9 C13D9.8 Caenorhabditis elegans
WBGene00003575 ncx-10 Y97E10B.7 Caenorhabditis elegans
WBGene00003606 nhr-7 F54D1.4 Caenorhabditis elegans
WBGene00003816 asns-1 F25G6.6 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064
  At 20 Centigrade: 72-96 hours after L4-adult molt. 6-7 days after first cleavage. 3-days post-L4 adult hermaphrodite Ce WBls:0000066
  At 20 Centigrade: 5-6 days after L4-adult molt. 8-9 days after first cleavage. 5-days post-L4 adult hermaphrodite Ce WBls:0000068
  At 20 Centigrade: 8-9 days after L4-adult molt. 11-12 days after first cleavage. 8-days post-L4 adult hermaphrodite Ce WBls:0000672
  At 20 Centigrade: 15-16 days after L4-adult molt. 18-19 days after first cleavage. 15-days post-L4 adult hermaphrodite Ce WBls:0000675
  At 20 Centigrade: 11-12 days after L4-adult molt. 14-15 days after first cleavage. 11-days post-L4 adult hermaphrodite Ce WBls:0000797

0 Processes

0 Regulated By Gene

0 Regulated By Molecule