WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2, fold change > 2, FDR < 0.05. Description  Transcripts that showed significantly increased expression in AFD neurons at lin-15(n765ts); oyIs95 animals shifted from 20C to 25C for 16 hours at L4 larva stage, comparing to animals shifted from 20C to 15C for 16 hours at L4 larva stage.
Primary Identifier  WBPaper00065158:25C_vs_15C_upregulated_AFD Regulated By Treatment  Temperature Shift: 25C vs 15C for 16 hours at L4 larva stage.
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of two ciliated neurons that are part of the amphid sensillum; the endings of AFD have numerous villi, which poke into the amphid sheath cells. AFD   WBbt:0005662

400 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000164 apm-3 F53H8.1 Caenorhabditis elegans
WBGene00000170 aqp-2 C01G6.1 Caenorhabditis elegans
WBGene00000188 arl-3 F19H8.3 Caenorhabditis elegans
WBGene00000220 atf-2 K08F8.2 Caenorhabditis elegans
WBGene00000221 atf-4 T04C10.4 Caenorhabditis elegans
WBGene00000279 cah-1 F54D8.4 Caenorhabditis elegans
WBGene00000433 ceh-8 ZK265.4 Caenorhabditis elegans
WBGene00000452 ceh-31 C33D12.1 Caenorhabditis elegans
WBGene00000468 ces-1 F43G9.11 Caenorhabditis elegans
WBGene00000481 cha-1 ZC416.8 Caenorhabditis elegans
WBGene00000503 cht-1 C04F6.3 Caenorhabditis elegans
WBGene00000535 cpi-1 K08B4.6 Caenorhabditis elegans
WBGene00000560 cnc-6 Y46E12A.1 Caenorhabditis elegans
WBGene00000650 col-74 ZK1248.2 Caenorhabditis elegans
WBGene00000672 col-97 ZK1010.7 Caenorhabditis elegans
WBGene00000675 col-101 K02D7.3 Caenorhabditis elegans
WBGene00000695 col-121 F56D5.1 Caenorhabditis elegans
WBGene00000846 cup-5 R13A5.1 Caenorhabditis elegans
WBGene00000853 cut-6 M142.2 Caenorhabditis elegans
WBGene00000866 cyb-2.1 Y43E12A.1 Caenorhabditis elegans
WBGene00000867 cyb-2.2 H31G24.4 Caenorhabditis elegans
WBGene00000895 dac-1 B0412.1 Caenorhabditis elegans
WBGene00001006 dlg-1 C25F6.2 Caenorhabditis elegans
WBGene00001064 dpy-2 T14B4.6 Caenorhabditis elegans
WBGene00001210 egl-46 K11G9.4 Caenorhabditis elegans
WBGene00001374 exp-2 F12F3.1 Caenorhabditis elegans
WBGene00001387 far-3 F15B9.1 Caenorhabditis elegans
WBGene00001462 flp-19 M79.4 Caenorhabditis elegans
WBGene00001543 gcy-18 ZK896.8 Caenorhabditis elegans
WBGene00001557 gcy-37 C54E4.3 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule