WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Gaussian error propagation. As cutoff for the up-regulated genes authors used log2 fold change > 1 and P < 0.05 and as cutoff for the down-regulated genes authors used log2 fold change < -1 and P < 0.05. Description  mRNAs that showed increased expression in 1 cell mebryo comparing to in oocyte, according to RNAseq analysis.
Primary Identifier  WBPaper00045420:fertilization_upregulated_transcript

0 Anatomy Terms

597 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000039 acn-1 C42D8.5 Caenorhabditis elegans
WBGene00000080 adr-2 T20H4.4 Caenorhabditis elegans
WBGene00000089 aex-6 Y87G2A.4 Caenorhabditis elegans
WBGene00000118 alh-12 Y69F12A.2 Caenorhabditis elegans
WBGene00000193 arl-6 C38D4.8 Caenorhabditis elegans
WBGene00000217 asp-4 R12H7.2 Caenorhabditis elegans
WBGene00000221 atf-4 T04C10.4 Caenorhabditis elegans
WBGene00000266 bre-1 C53B4.7 Caenorhabditis elegans
WBGene00000285 cal-1 C13C12.1 Caenorhabditis elegans
WBGene00000430 ceh-5 C16C2.1 Caenorhabditis elegans
WBGene00000445 ceh-22 F29F11.5 Caenorhabditis elegans
WBGene00000449 ceh-27 F46F3.1 Caenorhabditis elegans
WBGene00000455 ceh-34 C10G8.6 Caenorhabditis elegans
WBGene00000457 ceh-36 C37E2.4 Caenorhabditis elegans
WBGene00000458 ceh-37 C37E2.5 Caenorhabditis elegans
WBGene00000468 ces-1 F43G9.11 Caenorhabditis elegans
WBGene00000476 cfi-1 T23D8.8 Caenorhabditis elegans
WBGene00000492 che-13 F59C6.7 Caenorhabditis elegans
WBGene00000521 cky-1 C15C8.2 Caenorhabditis elegans
WBGene00000620 col-43 ZC513.8 Caenorhabditis elegans
WBGene00000690 col-116 F17E9.1 Caenorhabditis elegans
WBGene00000695 col-121 F56D5.1 Caenorhabditis elegans
WBGene00000780 cpn-4 F49D11.8 Caenorhabditis elegans
WBGene00001040 dnj-22 T23B12.7 Caenorhabditis elegans
WBGene00001075 dpy-14 H27M09.4 Caenorhabditis elegans
WBGene00001108 dsl-6 H02I12.4 Caenorhabditis elegans
WBGene00001123 dyf-7 C43C3.3 Caenorhabditis elegans
WBGene00001159 eff-1 C26D10.5 Caenorhabditis elegans
WBGene00001210 egl-46 K11G9.4 Caenorhabditis elegans
WBGene00001251 elt-3 K02B9.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  Also called zygote. -50min till 0min of first cleavage at 20 Centigrade. Contains 1 cell. 1-cell embryo Ce WBls:0000006

0 Processes

0 Regulated By Gene

0 Regulated By Molecule