WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in ADE sheath cell, ADE socket cell, amphid sheath cell, amphid socket cell, cephalic sheath cell, CEP socket cell, IL sheath cell, IL socket cell, OL sheath cell, OL socket cell, PDE sheath cell, PDE socket cell, phasmid sheath cell, phasmid socket cell according to single cell RNAseq.
Primary Identifier  WBPaper00061340:Glia
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14 Anatomy Terms

Definition Name Synonym Primary Identifier
sheath cell of amphid sensillum. amphid sheath cell   WBbt:0006754
Hypodermal socket cell of the phasmid sensillum. phasmid socket cell Phso WBbt:0008410
epithelial support cell of the amphid sensilla. amphid socket cell AMso WBbt:0008379
post-deirid socket cell. PDE socket cell   WBbt:0008421
outer labial socket cell. OL socket cell   WBbt:0008419
inner labial socket cell. IL socket cell   WBbt:0008418
sheath cell of phasmid sensillum phasmid sheath cell   WBbt:0006755
sheath cell of the cephalic sensilla. cephalic sheath cell   WBbt:0008406
anterior deirid socket cell. ADE socket cell   WBbt:0008416
posterior deirid sheath cell. PDE sheath cell   WBbt:0008415
outer labial sheath cell. OL sheath cell   WBbt:0008413
cephalic socket cell. CEP socket cell   WBbt:0008417
inner labial sheath cell. IL sheath cell   WBbt:0008412
anterior deirid sheath cell. ADE sheath cell   WBbt:0008411

298 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000004 aat-3 F52H2.2 Caenorhabditis elegans
WBGene00000170 aqp-2 C01G6.1 Caenorhabditis elegans
WBGene00000174 aqp-6 C32C4.2 Caenorhabditis elegans
WBGene00000228 atn-1 W04D2.1 Caenorhabditis elegans
WBGene00000237 bam-2 Y71F9AR.1 Caenorhabditis elegans
WBGene00000395 cdh-3 ZK112.7 Caenorhabditis elegans
WBGene00000420 ced-6 F56D2.7 Caenorhabditis elegans
WBGene00000433 ceh-8 ZK265.4 Caenorhabditis elegans
WBGene00000448 pros-1 K12H4.1 Caenorhabditis elegans
WBGene00000451 ceh-30 C33D12.7 Caenorhabditis elegans
WBGene00000452 ceh-31 C33D12.1 Caenorhabditis elegans
WBGene00000463 ceh-43 C28A5.4 Caenorhabditis elegans
WBGene00000523 clc-2 C01C10.1 Caenorhabditis elegans
WBGene00000526 clc-5 C01C10.4 Caenorhabditis elegans
WBGene00000591 coh-1 K08A8.3 Caenorhabditis elegans
WBGene00000673 col-98 F14F7.1 Caenorhabditis elegans
WBGene00000723 col-150 B0024.2 Caenorhabditis elegans
WBGene00000777 cpn-1 F43G9.9 Caenorhabditis elegans
WBGene00000792 crb-1 F11C7.4 Caenorhabditis elegans
WBGene00000872 cyk-1 F11H8.4 Caenorhabditis elegans
WBGene00000990 dhs-27 C04F6.5 Caenorhabditis elegans
WBGene00001001 dis-3 C04G2.6 Caenorhabditis elegans
WBGene00001006 dlg-1 C25F6.2 Caenorhabditis elegans
WBGene00001072 dpy-10 T14B4.7 Caenorhabditis elegans
WBGene00001089 dre-1 K04A8.6 Caenorhabditis elegans
WBGene00001170 egl-1 F23B12.9 Caenorhabditis elegans
WBGene00001186 egl-18 F55A8.1 Caenorhabditis elegans
WBGene00001193 egl-26 C23H3.1 Caenorhabditis elegans
WBGene00001204 egl-38 C04G2.7 Caenorhabditis elegans
WBGene00001253 elt-6 F52C12.5 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule