WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in intestinal muscle, rectal muscle according to single cell RNAseq.
Primary Identifier  WBPaper00061340:Intestinal_and_rectal_muscle
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2 Anatomy Terms

Definition Name Synonym Primary Identifier
intestinal muscle cell, attach to intestine and body wall anterior to anus intestinal muscle stomato-intestinal muscle WBbt:0005796
muscle that controls hermaphrodite rectal opening. rectal muscle anal muscle WBbt:0005803

299 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000066 act-4 M03F4.2 Caenorhabditis elegans
WBGene00000170 aqp-2 C01G6.1 Caenorhabditis elegans
WBGene00000277 cab-1 C23H4.1 Caenorhabditis elegans
WBGene00000443 ceh-20 F31E3.1 Caenorhabditis elegans
WBGene00000455 ceh-34 C10G8.6 Caenorhabditis elegans
WBGene00000540 cln-3.2 C01G8.2 Caenorhabditis elegans
WBGene00000561 cnd-1 C34E10.7 Caenorhabditis elegans
WBGene00000584 cog-1 R03C1.3 Caenorhabditis elegans
WBGene00000800 cars-1 Y23H5A.7 Caenorhabditis elegans
WBGene00000857 cwn-1 K10B4.6 Caenorhabditis elegans
WBGene00000964 dhp-2 C47E12.8 Caenorhabditis elegans
WBGene00001007 dli-1 C39E9.14 Caenorhabditis elegans
WBGene00001096 dsc-1 C18B12.3 Caenorhabditis elegans
WBGene00001188 egl-20 W08D2.1 Caenorhabditis elegans
WBGene00001328 epi-1 K08C7.3 Caenorhabditis elegans
WBGene00001340 etr-1 T01D1.2 Caenorhabditis elegans
WBGene00001413 fem-3 C01F6.4 Caenorhabditis elegans
WBGene00001430 fkb-5 C50F2.6 Caenorhabditis elegans
WBGene00001453 flp-10 T06C10.4 Caenorhabditis elegans
WBGene00001503 fum-1 H14A12.2 Caenorhabditis elegans
WBGene00001572 gei-15 M03A8.4 Caenorhabditis elegans
WBGene00001651 gon-2 T01H8.5 Caenorhabditis elegans
WBGene00001745 gsa-1 R06A10.2 Caenorhabditis elegans
WBGene00001824 hbl-1 F13D11.2 Caenorhabditis elegans
WBGene00001940 his-66 H02I12.6 Caenorhabditis elegans
WBGene00001949 hlh-2 M05B5.5 Caenorhabditis elegans
WBGene00001953 hlh-8 C02B8.4 Caenorhabditis elegans
WBGene00002004 hsf-1 Y53C10A.12 Caenorhabditis elegans
WBGene00002011 hsp-12.2 C14B9.1 Caenorhabditis elegans
WBGene00002069 ikb-1 C04F12.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule