WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Enrichment values are expressed as mean percent rank. The p value was computed by comparing all enrichment values for a given transcript to all enrichment values of all transcripts by a one-tailed t test. Significantly enriched genes are those with p value < 0.01. Description  Genes enriched in L4 larva intestinal AIN-2 miRISCs, potentially involved in non-development processes. Pges-1-ain-2-gfp IP was performed in synchronized L4 larva.
Primary Identifier  WBPaper00040985:AIN-2_L4_intestine

1 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772

440 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000002 aat-1 F27C8.1 Caenorhabditis elegans
WBGene00000007 aat-6 T11F9.4 Caenorhabditis elegans
WBGene00000018 abl-1 M79.1 Caenorhabditis elegans
WBGene00000020 abt-2 F12B6.1 Caenorhabditis elegans
WBGene00000070 acy-3 C44F1.5 Caenorhabditis elegans
WBGene00000136 amt-4 C05E11.5 Caenorhabditis elegans
WBGene00000137 amx-1 R13G10.2 Caenorhabditis elegans
WBGene00000195 arr-1 F53H8.2 Caenorhabditis elegans
WBGene00000268 bre-3 B0464.4 Caenorhabditis elegans
WBGene00000270 bre-5 T12G3.8 Caenorhabditis elegans
WBGene00000283 cah-5 R173.1 Caenorhabditis elegans
WBGene00000442 ceh-19 F20D12.6 Caenorhabditis elegans
WBGene00000530 clh-3 E04F6.11 Caenorhabditis elegans
WBGene00000554 cnb-1 F55C10.1 Caenorhabditis elegans
WBGene00000838 cul-3 Y108G3AL.1 Caenorhabditis elegans
WBGene00000897 daf-1 F29C4.1 Caenorhabditis elegans
WBGene00000900 daf-4 C05D2.1 Caenorhabditis elegans
WBGene00000901 daf-5 W01G7.1 Caenorhabditis elegans
WBGene00000912 daf-16 R13H8.1 Caenorhabditis elegans
WBGene00000988 dhs-25 F09E10.3 Caenorhabditis elegans
WBGene00001038 dnj-20 T15H9.7 Caenorhabditis elegans
WBGene00001053 dop-2 K09G1.4 Caenorhabditis elegans
WBGene00001082 dpy-23 R160.1 Caenorhabditis elegans
WBGene00001086 dpy-27 R13G10.1 Caenorhabditis elegans
WBGene00001089 dre-1 K04A8.6 Caenorhabditis elegans
WBGene00001182 egl-13 T22B7.1 Caenorhabditis elegans
WBGene00001240 elo-2 F11E6.5 Caenorhabditis elegans
WBGene00001243 elo-5 F41H10.7 Caenorhabditis elegans
WBGene00001244 elo-6 F41H10.8 Caenorhabditis elegans
WBGene00001330 eps-8 Y57G11C.24 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015007 ain-2 B0041.2 Caenorhabditis elegans

0 Regulated By Molecule