WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq package with an FDR of < 0.05. Description  Genes significantely Down-regulated by GRO-seq in csr-1 hypomorph vs. N2 using DESeq p < 0.05.
Primary Identifier  WBPaper00045050:csr-1(hypomorph)_downregulated
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0 Anatomy Terms

351 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000165 aps-3 Y48G8AL.14 Caenorhabditis elegans
WBGene00000214 asp-1 Y39B6A.20 Caenorhabditis elegans
WBGene00000254 bli-4 K04F10.4 Caenorhabditis elegans
WBGene00000257 bmk-1 F23B12.8 Caenorhabditis elegans
WBGene00000298 cat-4 F32G8.6 Caenorhabditis elegans
WBGene00000369 ccf-1 Y56A3A.20 Caenorhabditis elegans
WBGene00000436 ceh-12 F33D11.4 Caenorhabditis elegans
WBGene00000465 cpg-1 C07G2.1 Caenorhabditis elegans
WBGene00000473 cey-2 F46F11.2 Caenorhabditis elegans
WBGene00000496 chs-1 T25G3.2 Caenorhabditis elegans
WBGene00000592 coh-3 F08H9.1 Caenorhabditis elegans
WBGene00000602 col-13 F15H10.2 Caenorhabditis elegans
WBGene00000677 col-103 F56B3.1 Caenorhabditis elegans
WBGene00000868 cyb-3 T06E6.2 Caenorhabditis elegans
WBGene00000935 daz-1 F56D1.7 Caenorhabditis elegans
WBGene00000966 dhs-2 F55A12.4 Caenorhabditis elegans
WBGene00000967 dhs-3 T02E1.5 Caenorhabditis elegans
WBGene00001076 dpy-17 F54D8.1 Caenorhabditis elegans
WBGene00001214 ego-1 F26A3.3 Caenorhabditis elegans
WBGene00001262 emb-8 K10D2.6 Caenorhabditis elegans
WBGene00001337 ears-1 ZC434.5 Caenorhabditis elegans
WBGene00001423 fib-1 T01C3.7 Caenorhabditis elegans
WBGene00001501 ftn-2 D1037.3 Caenorhabditis elegans
WBGene00001601 glh-4 T12F5.3 Caenorhabditis elegans
WBGene00001604 gln-3 Y105C5B.28 Caenorhabditis elegans
WBGene00001623 glt-5 Y53C12A.2 Caenorhabditis elegans
WBGene00001748 gsp-2 F56C9.1 Caenorhabditis elegans
WBGene00001865 him-6 T04A11.6 Caenorhabditis elegans
WBGene00001879 his-5 F45F2.3 Caenorhabditis elegans
WBGene00001884 his-10 ZK131.4 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00017641 csr-1 F20D12.1 Caenorhabditis elegans

0 Regulated By Molecule