WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 55 expressed in: Intestinal-rectal valve.
Primary Identifier  WBPaper00065623:55

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of seven motoneurons that innervate dorsal muscles and have cell bodies in the ventral cord. DB neuron   WBbt:0005274
cell that forms intestinal-rectal valve. rectal valve cell intestinal-rectal valve cell WBbt:0005797
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two neurons with cell bodies situated in the lumbar ganglion. PLN   WBbt:0006855
Neuron class of four interneurons, which send processes posteriorly down the sub-lateral cords. SIA   WBbt:0005361

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000140 anc-1 ZK973.6 Caenorhabditis elegans
WBGene00001564 icl-1 C05E4.9 Caenorhabditis elegans
WBGene00006603 tps-2 F19H8.1 Caenorhabditis elegans
WBGene00008944 F19B2.5 F19B2.5 Caenorhabditis elegans
WBGene00012140 T28F4.5 T28F4.5 Caenorhabditis elegans
WBGene00019748 atg-2 M03A8.2 Caenorhabditis elegans
WBGene00021048 lro-1 W05H9.1 Caenorhabditis elegans
WBGene00018101 math-27 F36H5.2 Caenorhabditis elegans
WBGene00016027 C23H5.8 C23H5.8 Caenorhabditis elegans
WBGene00003786 npa-1 VC5.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule