WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  CellRanger, DecontX, Monocle3, Louvain algorithm. Description  Single-cell RNA-Seq cell group 56 expressed in: Excretory cells.
Primary Identifier  WBPaper00065623:56

6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of eleven motoneurons, distributed along the ventral cord, which innervate ventral body muscles. VB neuron   WBbt:0005336
Neuron class of seven motoneurons that innervate dorsal muscles and have cell bodies in the ventral cord. DB neuron   WBbt:0005274
H-shaped cell associated with the excretory system, largest cell in C. elegans. excretory cell excretory canal cell WBbt:0005812
Neuron class of three interneurons, which send processes anteriorly up the sub-lateral cords in the head. SAB   WBbt:0005396
Neuron class of two neurons with cell bodies situated in the lumbar ganglion. PLN   WBbt:0006855
Neuron class of four interneurons, which send processes posteriorly down the sub-lateral cords. SIA   WBbt:0005361

10 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009679 F44D12.2 F44D12.2 Caenorhabditis elegans
WBGene00012416 Y7A9A.1 Y7A9A.1 Caenorhabditis elegans
WBGene00012585 lips-15 Y38E10A.7 Caenorhabditis elegans
WBGene00013074 hmit-1.2 Y51A2D.5 Caenorhabditis elegans
WBGene00016848 klo-1 C50F7.10 Caenorhabditis elegans
WBGene00017124 E04F6.4 E04F6.4 Caenorhabditis elegans
WBGene00018085 ttr-20 F36A4.8 Caenorhabditis elegans
WBGene00009466 spex-2 F36D1.7 Caenorhabditis elegans
WBGene00021909 Y55B1BL.1 Y55B1BL.1 Caenorhabditis elegans
WBGene00017599 F19F10.3 F19F10.3 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 24-48 hours after L4-adult molt. 4-5 days after first cleavage. 1-day post-L4 adult hermaphrodite Ce WBls:0000064

0 Processes

0 Regulated By Gene

0 Regulated By Molecule