WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Expression of GFP under the control of the C09F5.1 promoter was observed through all developmental stages. In 3-fold embryos, GFP was localized in seam cells and hypodermal cells. In the larval stage, strong expression was detected in the sensillar region (lip), seam cells, vulval cells, intestinal cells, and tail neurons. Expression in the hypodermal cells gradually decreased as the worms progressed to L3 and L4 and almost no expression was detected in the hypodermal cells of young adults. During vulva formation, GFP was detected in a subset of vulval cells (mainly vulA) in L4. After completion of vulval development, overall GFP signal in the vulval region decreased and only persisted at the vulval junction. Primary Identifier  Expr14409

9 Anatomy Terms

Definition Name Synonym Primary Identifier
female genital. vulva   WBbt:0006748
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
A valve tissue that connects the spermatheca and the uterus of a hermaphrodite gonad. spermathecal-uterine junction sp-ut valve WBbt:0006756
neuron with its cell body situated in the tail, posterior to rectum. tail neuron   WBbt:0006759
a group of hypodermal cells that lie along the apical midline of the hypodermis, at the extreme left and right sides between nose and tail seam cell lateral hypodermis WBbt:0005753
adult vulval toroid cell, A, formed by fusion of precursors of lineage names P5.paaa, P5.paap, P7.pppa and P7.pppp vulA   WBbt:0006762
primary cell type that forms the hypodermis. hypodermal cell   WBbt:0007846
Constituent cell of a hermaphrodite vulva. vulval cell vulval epithelial cell WBbt:0007831
sensillum in the head, each with a CEP receptor neuron. cephalic sensillum   WBbt:0006920

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00015647 C09F5.1 C09F5.1 Caenorhabditis elegans

5 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  A developmental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until adulthood. larva Ce WBls:0000023
  The C. elegans life stage spanning 520-620min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and tripple fold. A stage between 2-fold embryo and fully-elongated embryo. Also called pretzel embryo or pretzel stage. 3-fold embryo Ce WBls:0000020
  All C. elegans development stages, including embryo, larva and adult stage. all stages Ce WBls:0000002