WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Adult Expression: Reproductive System; spermatheca; gonad sheath cells; excretory gland cells; Nervous System; pharyngeal neurons; Larval Expression: intestine; rectal gland cells; Reproductive System; developing spermatheca; gonad sheath cells; excretory gland cells; Nervous System; pharyngeal neurons; Primary Identifier  Expr6686
Remark  Strain: BC14878 Reporter Gene  [tsg-32::gfp] transcriptional fusion. PCR products were amplified using primer A: 5' [GTGTGCGCGGCAATTTTT] 3' and primer B 5' [GAGATTGTAGCACTTGCTGGG] 3'.

8 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
an accordion-like tube that contains sperm and is the site of oocyte fertilization. spermatheca   WBbt:0005319
Complement of nervous tissue (neurones, nerves, receptors and support cells) serving to detect, relay and coordinate information about an animal`s internal and external environments and to initiate and integrate its effector responses and activities. nervous system   WBbt:0005735
gland cell of the secretory-excretory system, sends processes to ring, opens into excretory duct. excretory gland cell exc gl WBbt:0005776
neuron of the pharyngeal nervous system. pharyngeal neuron   WBbt:0005439
  rectal gland cell   WBbt:0005799
five pairs of thin gonadal sheath cells form a single layer covering the germ line component of each arm, each pair occupying a stereotyped position along the gonad proximal-distal axis. gonadal sheath cell   WBbt:0005828
  reproductive system   WBbt:0005747

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006416 sams-5 T13A10.11 Caenorhabditis elegans

2 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  A developmental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until adulthood. larva Ce WBls:0000023