WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  The ida-1 gene promoter-driven GFP expression pattern in males differs from hermaphrodites, especially in the tail, where many more fluorescent cells are observed. Male larvae appear very similar to hermaphrodite larvae, the only difference being that the PVP neurons in the preanal ganglion showed higher GFP expression levels. It was concluded that all neurons expressing GFP in the hermaphrodite pharyngeal nerve ring and in the tail also express GFP in males. In adult males, additional fluorescence is seen in neurons anterior to the nerve ring, in the ventral cord and many more in the tail. The four additional GFP-expressing cells in the procorpus just anterior to the pharyngeal bulb have not been identified. Expression in the male-specific CEM neurons at the anterior end of the nerve ring appeared variable. The hermaphrodite-specific cells VC, HSN, and uv1 observed to express GFP are not found in males. Nonetheless, several cell bodies in the male ventral cord expressed GFP. Dorsally directed processes emanate from them, which identifies them as CAn, a set of eight motoneurons. As in hermaphrodites, PDE weakly expressed GFP. In the male tail, about 20 neurons express GFP. They include PHA, PHB, PHC, and PVP in the preanal ganglion, which are already seen in larvae. Some of the rays contain GFP-filled axons that extend all the way to the tip of the ray. Rays 2, 8, and 9 show the highest expression levels; axons of rays 1, 4, and 6 fluoresce more weakly. No GFP expression is observed in the spicules. Primary Identifier  Expr843
Remark  Reporter gene fusion type not specified. To analyze ida-1 gene expression in males, the pida-1::GFP transgenic strain BL5715 was crossed with the him-8 (high incidence of males) mutant strain BW1663. cgc6469 mentioned that this reporter gene is transcriptional fusion.

54 Anatomy Terms

Definition Name Synonym Primary Identifier
neuron with cell body associated with the ventral nerve cord. ventral cord neuron ventral cord motoneuron WBbt:0005300
Neuron class of six motoneurons in the ventral cord, which innervate ventral body muscles and the vm2 muscles of the vulva. VC neuron   WBbt:0005304
Herm. specific motor neurons (die in male embryo), innervate vulval muscles, serotonergic HSNL lineage name: ABplapppappa WBbt:0004758
Herm. specific motor neurons (die in male embryo), innervate vulval muscles, serotonergic HSNR lineage name: ABprapppappa WBbt:0004757
Neuron, dopaminergic of postderid sensillum PDEL lineage name: V5L.paaa WBbt:0004383
Neuron, dopaminergic of postderid sensillum PDER lineage name: V5R.paaa WBbt:0004382
the most extensive region of neuropil in the animal, consists of a large toroidal bundle of processes. nerve ring circumpharyngeal nerve ring WBbt:0006749
neuron making synapse on an effector (muscle, gland). motor neuron motoneuron WBbt:0005409
Phasmid neurons, probably chemosensory PHAL lineage name: ABplpppaapp WBbt:0004366
Phasmid neurons, probably chemosensory PHAR lineage name: ABprpppaapp WBbt:0004365
Phasmid neurons, probably chemosensory PHBL lineage name: ABplapppappp WBbt:0004364
Phasmid neuron, probably chemosensory PHBR lineage name: ABprapppappp WBbt:0005659
uterine-vulval cell proximal to the vulva. uv1   WBbt:0006791
Post-embryonic cell of pedigree V6L.pppapaaa, male sensory rays, neuron, striated rootlet. R4AL lineage name: V6L.pppapaaa WBbt:0004030
Post-embryonic cell of pedigree V6R.pppapaaa, male sensory rays, neuron, striated rootlet. R4AR lineage name: V6R.pppapaaa WBbt:0004029
Post-embryonic cell of pedigree V6L.papapaaa, male sensory rays, neuron, striated rootlet. R2AL lineage name: R2L.aaa WBbt:0004042
Post-embryonic cell of pedigree V6R.papapaaa, male sensory rays, neuron, striated rootlet. R2AR lineage name: R2R.aaa WBbt:0004041
Post-embryonic cell of pedigree TL.appaaapa, male sensory rays, neuron, darkly staining tip, open to outside. R8BL lineage name: TL.appaaapa WBbt:0003990
Male sensory rays, neuron, darkly staining tip, open to outside R8BR lineage name: TR.appaaapa WBbt:0003988
Post-embryonic cell of pedigree V6L.pppapapa, male sensory rays, neuron, darkly staining tip, open to outside. R4BL lineage name: V6L.pppapapa WBbt:0004028
Post-embryonic cell of pedigree V6R.pppapapa, male sensory rays, neuron, darkly staining tip, open to outside. R4BR lineage name: V6R.pppapapa WBbt:0004027
Post-embryonic cell of pedigree V6L.papapapa, male sensory rays, neuron, darkly staining tip, open to outside. R2BL lineage name: V6L.papapapa WBbt:0004040
Post-embryonic cell of pedigree V6R.papapapa, male sensory rays, neuron, darkly staining tip, open to outside. R2BR lineage name: V6R.papapapa WBbt:0004039
Male specific cephalic neurons (programmed cell death in hermaphrodite embryo) open to outside, possible function in male chemotaxis toward hermaphrodite. CEMDL lineage name: ABplaaaaaap WBbt:0004945
Male specific cephalic neurons (programmed cell death in hermaphrodite embryo) open to outside, possible function in male chemotaxis toward hermaphrodite. CEMDR lineage name: ABarpapaaap WBbt:0004943
Male specific cephalic neurons (programmed cell death in hermaphrodite embryo) open to outside, possible function in male chemotaxis toward hermaphrodite. CEMVL lineage name: ABplpaapapp WBbt:0004941
Post-embryonic cell of pedigree V5L.pppppapa, male sensory rays, neuron, darkly staining tip, open to outside. R1BL lineage name: V5L.pppppapa WBbt:0004048
Male specific cephalic neurons (programmed cell death in hermaphrodite embryo) open to outside, possible function in male chemotaxis toward hermaphrodite. CEMVR lineage name: ABprpaapapp WBbt:0004939
Post-embryonic cell of pedigree V5R.pppppapa, male sensory rays, neuron, darkly staining tip, open to outside. R1BR lineage name: V5R.pppppapa WBbt:0004046
Post-embryonic cell of pedigree TL.appapapa, male sensory rays, neuron, darkly staining tip, open to outside. R9BL lineage name: TL.appapapa WBbt:0003968

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002048 ida-1 B0244.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041