WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Neuronal Expression: AVA, AVB, AVD, AVE, PVC, AIB, AIN, AUA, AVH?, AVJ, RIC, RMD, SMD, I2. Non-neuronal Expression: hypodermis, pharyngeal muscle, amphid socket. Primary Identifier  Expr8845
Remark  Picture: Fig 3.
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36 Anatomy Terms

Definition Name Synonym Primary Identifier
Epidermal layer. hypodermis epidermis WBbt:0005733
type of cells that make up muscle layers in the pharynx. pharyngeal muscle cell   WBbt:0005451
Amphid socket cell, left AMsoL lineage name: ABplpaapapa WBbt:0003931
Amphid socket cell, right AMsoR lineage name: ABprpaapapa WBbt:0003929
Ring interneuron RICL lineage name: ABplppaaaapp WBbt:0003941
Ring interneuron RICR lineage name: ABprppaaaapp WBbt:0003940
Ventral cord interneuron, cell body in lumbar ganglion, synapses onto VB and DB motor neurons, formerly called delta. PVCL lineage name: ABplpppaapaa WBbt:0004094
Ventral cord interneuron, cell body in lumbar ganglion, synapses onto VB and DB motor neurons, formerly called delta. PVCR lineage name: ABprpppaapaa WBbt:0004092
Pharyngeal interneurons, ant sensory. I2L lineage name: ABalpappaapa WBbt:0004744
Pharyngeal interneurons, ant sensory. I2R lineage name: ABarapapaapa WBbt:0004743
Ring motor neuron/interneuron, has a posteriorly direct ed process that runs sublaterally SMDVR lineage name: ABarappppaa WBbt:0004969
Ring motor neuron/interneuron, has a posteriorly direct ed process that runs sublaterally SMDDR lineage name: ABprpapaaaa WBbt:0004971
Ring motor neuron/interneuron, has a posteriorly direct ed process that runs sublaterally SMDVL lineage name: ABalppappaa WBbt:0004970
Ring motor neuron/interneuron, has a posteriorly direct ed process that runs sublaterally SMDDL lineage name: ABplpapaaaa WBbt:0004972
Ventral cord interneuron, synapses onto VA, DA, and AS motor neurons; formerly called alpha AVAL lineage name: ABalppaaapa WBbt:0003870
Ventral cord interneuron, synapses onto VA, DA, and AS motor neurons; formerly called alpha AVAR lineage name: ABalaappapa WBbt:0003869
Ventral cord interneuron, synapses onto VB and DB motor neurons; formerly called beta. AVBR lineage name: ABprpaapaap WBbt:0003867
Ventral cord interneuron, synapses onto VB and DB motor neurons; formerly called beta. AVBL lineage name: ABplpaapaap WBbt:0003868
Ring motor neuron/interneuron, many synapses RMDVL lineage name: ABalppapaaa WBbt:0005031
Amphid interneuron AIBR lineage name: ABpraapappa WBbt:0003984
Amphid interneuron AIBL lineage name: ABplaapappa WBbt:0003985
Neuron, process runs with amphid processes but lacks cillialted ending AUAR lineage name: ABpraaappppp WBbt:0003871
Neuron, process runs with amphid processes but lacks cillialted ending AUAL lineage name: ABalpppppppp WBbt:0003872
Ventral cord interneuron, like AVD but outputs restricted to anterior cord. AVEL lineage name: ABalpppaaaa WBbt:0003864
Ventral cord interneuron, like AVD but outputs restricted to anterior cord. AVER lineage name: ABpraaaaaaa WBbt:0003863
Ventral cord interneuron, synapses onto VA, DA, AS motorneurons; formerly called delta. AVDL lineage name: ABalaaapalr WBbt:0003866
Ventral cord interneuron, synapses onto VA, DA, AS motorneurons; formerly called delta. AVDR lineage name: ABalaaapprl WBbt:0003865
Neuron, synapses like AVHL/R AVJR lineage name: ABalapppppa WBbt:0003846
Neuron, mainly postsynaptic in ventral cord and presynaptic in the ring AVHR lineage name: ABalappapaa WBbt:0003848
Neuron, synapses like AVHL/R AVJL lineage name: ABalapapppa WBbt:0003847

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004369 rig-1 K09E2.4 Caenorhabditis elegans

0 Life Stages