WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  The prig-6RIG-6::GFP construct drives expression of all RIG-6 isoforms in fusion with GFP, under their endogenous promoter. rig-6 expression is detected during embryogenesis and is maintained throughout adulthood. rig-6 is expressed in I1 and I3 pharyngeal interneurons, NSM motor neurons and other unidentified head neurons. RIG-6::GFP is also localized in the cell bodies and axons of different subtypes of VNC motorneurons, in the HSN and the CAN neurons. Neuronal expression of rig-6 also includes the ALM and PLM touch receptor neurons. Non-neuronal cells expressing rig-6 include somatic muscles and the hypodermis. We also detected rig-6 expression in the developing and adult EC. The prig-6RIG-6::GFP construct drives expression of all RIG-6 isoforms in fusion with GFP, under their endogenous promoter. rig-6 expression is detected during embryogenesis and is maintained throughout adulthood. rig-6 is expressed in I1 and I3 pharyngeal interneurons, NSM motor neurons and other unidentified head neurons. RIG-6::GFP is also localized in the cell bodies and axons of different subtypes of VNC motorneurons, in the HSN and the CAN neurons. Neuronal expression of rig-6 also includes the ALM and PLM touch receptor neurons. Non-neuronal cells expressing rig-6 include somatic muscles and the hypodermis. We also detected rig-6 expression in the developing and adult EC. Primary Identifier  Expr10584
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25 Anatomy Terms

Definition Name Synonym Primary Identifier
neuron with cell body associated with the ventral nerve cord. ventral cord neuron ventral cord motoneuron WBbt:0005300
Pharyngeal sensory-motorneurons m3R lineage name: ABaraappppp WBbt:0004469
Pharyngeal sensory-motorneurons m3L lineage name: ABaraapappp WBbt:0004471
neuron with its cell body situated in the head, excluding the pharynx. head neuron   WBbt:0006751
a single, H-shaped cell which lies just above the anus and connects the roof of the anal canal to the dorsal bodywall; its contractions act to increase the size of the anal opening by lifting the roof of the rectum and hence facilitate expulsion of intestinal contents. anal depressor muscle dilator muscle WBbt:0004292
neuron with its cell body situated in the tail, posterior to rectum. tail neuron   WBbt:0006759
Neuron class of one pharyngeal interneuron, posterior sensory. I5 neuron I5 WBbt:0004740
Pharyngeal interneurons: ant sensory, input from RIP I1L lineage name: ABalpapppaa WBbt:0004746
Pharyngeal interneurons: ant sensory, input from RIP I1R lineage name: ABarapappaa WBbt:0004745
ganglion in the head. head ganglion   WBbt:0005135
Neuron class of one male-specific sensory neuron associated with hook sensillum, receptor anterior to cloaca in male. HOB lineage name: P10.ppap WBbt:0004761
neuron in the male ray. ray neuron   WBbt:0006971
Pharyngeal motorneurons m2L lineage name: ABaraapappa WBbt:0004487
Pharyngeal motorneurons m2R lineage name: ABaraappppa WBbt:0004473
Neuron class of one pharyngeal interneuron. I4 neuron I4 WBbt:0004741
  gubernacular erector muscle   WBbt:0005824
specialized muscle in the male. anterior oblique muscle   WBbt:0005822
  gubernacular retractor muscle   WBbt:0005825
Male specific sensory /motor neuron, innervates spicule protractor muscle SPCL lineage name: B.alpaap WBbt:0004968
Male specific sensory /motor neuron, innervates spicule protractor muscle SPCR lineage name: B.arpaap WBbt:0004967
Sensory neuron of postcloacal sensilla in male PCAL lineage name: Y.plppd WBbt:0004408
Sensory neuron of postcloacal sensilla in male PCAR lineage name: Y.prppd WBbt:0004407
Neuron, ending is sheath of postcloacal sensilla in male PCBL lineage name: Y.plpa WBbt:0004406
Neuron, ending is sheath of postcloacal sensilla in male PCBR lineage name: Y.prpa WBbt:0004405
Neuron class of one male-specific sensory neuron associated with hook sensillum, receptor anterior to cloaca in male. HOA lineage name: P10.pppa WBbt:0004762

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016354 rig-6 C33F10.5 Caenorhabditis elegans

3 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003
  A developmental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until adulthood. larva Ce WBls:0000023