WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Top 300 enriched transcripts were determined by log2.ratio of the tpm in the cell type vs the tpm in the other cells * the log2 of the cell.type tpm. Description  Top 300 transcripts enriched in intestinal muscle, anal depressor muscle according to single cell RNAseq.
Primary Identifier  WBPaper00061340:mu_int_mu_anal
Paste the following link
Lists
This ExpressionCluster isn't in any lists. Upload a list.

2 Anatomy Terms

Definition Name Synonym Primary Identifier
a single, H-shaped cell which lies just above the anus and connects the roof of the anal canal to the dorsal bodywall; its contractions act to increase the size of the anal opening by lifting the roof of the rectum and hence facilitate expulsion of intestinal contents. anal depressor muscle dilator muscle WBbt:0004292
intestinal muscle cell, attach to intestine and body wall anterior to anus intestinal muscle stomato-intestinal muscle WBbt:0005796

300 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000063 act-1 T04C12.6 Caenorhabditis elegans
WBGene00000085 aex-2 T14B1.2 Caenorhabditis elegans
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
WBGene00000170 aqp-2 C01G6.1 Caenorhabditis elegans
WBGene00000277 cab-1 C23H4.1 Caenorhabditis elegans
WBGene00000368 ccb-1 T28F2.5 Caenorhabditis elegans
WBGene00000524 clc-3 ZK563.4 Caenorhabditis elegans
WBGene00000530 clh-3 E04F6.11 Caenorhabditis elegans
WBGene00000665 col-90 C29E4.1 Caenorhabditis elegans
WBGene00000768 cor-1 R01H10.3 Caenorhabditis elegans
WBGene00000779 cpn-3 F28H1.2 Caenorhabditis elegans
WBGene00000857 cwn-1 K10B4.6 Caenorhabditis elegans
WBGene00001096 dsc-1 C18B12.3 Caenorhabditis elegans
WBGene00001116 dyc-1 C33G3.1 Caenorhabditis elegans
WBGene00001184 egl-15 F58A3.2 Caenorhabditis elegans
WBGene00001188 egl-20 W08D2.1 Caenorhabditis elegans
WBGene00001190 egl-23 Y37A1B.11 Caenorhabditis elegans
WBGene00001328 epi-1 K08C7.3 Caenorhabditis elegans
WBGene00001340 etr-1 T01D1.2 Caenorhabditis elegans
WBGene00001373 exp-1 H35N03.1 Caenorhabditis elegans
WBGene00001385 far-1 F02A9.2 Caenorhabditis elegans
WBGene00001386 far-2 F02A9.3 Caenorhabditis elegans
WBGene00001489 frm-2 T04C9.6 Caenorhabditis elegans
WBGene00001503 fum-1 H14A12.2 Caenorhabditis elegans
WBGene00001572 gei-15 M03A8.4 Caenorhabditis elegans
WBGene00001581 gfi-1 F57F4.3 Caenorhabditis elegans
WBGene00001592 glc-2 F25F8.2 Caenorhabditis elegans
WBGene00001643 gly-18 F22D6.11 Caenorhabditis elegans
WBGene00001788 gst-40 F56B3.10 Caenorhabditis elegans
WBGene00001863 him-4 F15G9.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027

0 Processes

0 Regulated By Gene

0 Regulated By Molecule