WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Cufflinks FPKM value >=1. Description  Transcripts expressed in NMDA neuron, according to PAT-Seq analysis using Pnmr-1-GFP-3XFLAG mRNA tagging.
Primary Identifier  WBPaper00050990:NMDA-neuron_expressed
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6 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of one ventral cord interneuron, few synapses. AVG lineage name: ABprpapppap WBbt:0003850
Neuron class of two interneurons with cell bodies situated in the lateral ganglia. AVD   WBbt:0006818
Neuron class of two interneurons with cell bodies situated in the lateral ganglion close to the ring neuropile. AVE   WBbt:0006819
Neuron class of two interneuron motoneurons that innervate muscles in the head via NMJs in the nerve ring. RIM   WBbt:0005835
Neuron class of two interneurons with cell bodies situated in the lateral ganglia adjacent to the neuropile of the nerve ring. AVA   WBbt:0005842
Neuron class of two interneurons with cell bodies situated in the lumbar ganglia. PVC   WBbt:0005840

4250 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000004 aat-3 F52H2.2 Caenorhabditis elegans
WBGene00000012 abf-1 C50F2.9 Caenorhabditis elegans
WBGene00000020 abt-2 F12B6.1 Caenorhabditis elegans
WBGene00000036 ace-2 Y44E3A.2 Caenorhabditis elegans
WBGene00000040 aco-1 ZK455.1 Caenorhabditis elegans
WBGene00000041 aco-2 F54H12.1 Caenorhabditis elegans
WBGene00000051 acr-12 R01E6.4 Caenorhabditis elegans
WBGene00000055 acr-16 F25G6.3 Caenorhabditis elegans
WBGene00000063 act-1 T04C12.6 Caenorhabditis elegans
WBGene00000064 act-2 T04C12.5 Caenorhabditis elegans
WBGene00000066 act-4 M03F4.2 Caenorhabditis elegans
WBGene00000067 act-5 T25C8.2 Caenorhabditis elegans
WBGene00000068 acy-1 F17C8.1 Caenorhabditis elegans
WBGene00000080 adr-2 T20H4.4 Caenorhabditis elegans
WBGene00000081 ads-1 Y50D7A.7 Caenorhabditis elegans
WBGene00000083 adt-2 F08C6.1 Caenorhabditis elegans
WBGene00000089 aex-6 Y87G2A.4 Caenorhabditis elegans
WBGene00000090 age-1 B0334.8 Caenorhabditis elegans
WBGene00000092 ags-3 F32A6.4 Caenorhabditis elegans
WBGene00000096 ahr-1 C41G7.5 Caenorhabditis elegans
WBGene00000097 aip-1 F58E10.4 Caenorhabditis elegans
WBGene00000100 ajm-1 C25A11.4 Caenorhabditis elegans
WBGene00000102 akt-1 C12D8.10 Caenorhabditis elegans
WBGene00000105 alg-1 F48F7.1 Caenorhabditis elegans
WBGene00000107 alh-1 F54D8.3 Caenorhabditis elegans
WBGene00000110 alh-4 T05H4.13 Caenorhabditis elegans
WBGene00000111 alh-5 T08B1.3 Caenorhabditis elegans
WBGene00000112 alh-6 F56D12.1 Caenorhabditis elegans
WBGene00000113 alh-7 F45H10.1 Caenorhabditis elegans
WBGene00000114 alh-8 F13D12.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  All C. elegans development stages, including embryo, larva and adult stage. all stages Ce WBls:0000002

0 Processes

0 Regulated By Gene

0 Regulated By Molecule