WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  DESeq2, Benjamini-Hochberg multiple hypothesis corrected p-value < 0.05 and fold change > 2. Description  Transcripts that showed significantly decreased expression in animals lacking P granules by RNAi experiments targeting pgl-1, pgl-3, glh-1 and glh-4, and unc-119-GFP(+), comparing to in control animals, at 2-day post L4 adult hermaphrodite stage.
Primary Identifier  WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
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0 Anatomy Terms

3187 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000041 aco-2 F54H12.1 Caenorhabditis elegans
WBGene00000064 act-2 T04C12.5 Caenorhabditis elegans
WBGene00000080 adr-2 T20H4.4 Caenorhabditis elegans
WBGene00000090 age-1 B0334.8 Caenorhabditis elegans
WBGene00000093 agt-1 Y62E10A.5 Caenorhabditis elegans
WBGene00000098 air-1 K07C11.2 Caenorhabditis elegans
WBGene00000099 air-2 B0207.4 Caenorhabditis elegans
WBGene00000101 aka-1 D1022.7 Caenorhabditis elegans
WBGene00000102 akt-1 C12D8.10 Caenorhabditis elegans
WBGene00000121 aly-2 F23B2.6 Caenorhabditis elegans
WBGene00000122 aly-3 M18.7 Caenorhabditis elegans
WBGene00000143 apc-2 K06H7.6 Caenorhabditis elegans
WBGene00000144 apc-10 F15H10.3 Caenorhabditis elegans
WBGene00000145 apc-11 F35G12.9 Caenorhabditis elegans
WBGene00000146 ape-1 F46F3.4 Caenorhabditis elegans
WBGene00000155 app-1 W03G9.4 Caenorhabditis elegans
WBGene00000159 aps-1 F29G9.3 Caenorhabditis elegans
WBGene00000162 apd-3 W09G10.4 Caenorhabditis elegans
WBGene00000165 aps-3 Y48G8AL.14 Caenorhabditis elegans
WBGene00000168 apx-1 K08D9.3 Caenorhabditis elegans
WBGene00000186 ark-1 C01C7.1 Caenorhabditis elegans
WBGene00000196 aars-1 W02B12.6 Caenorhabditis elegans
WBGene00000202 exos-4.2 Y6D11A.1 Caenorhabditis elegans
WBGene00000206 asb-1 F35G12.10 Caenorhabditis elegans
WBGene00000209 asg-1 K07A12.3 Caenorhabditis elegans
WBGene00000226 atl-1 T06E4.3 Caenorhabditis elegans
WBGene00000229 atp-2 C34E10.6 Caenorhabditis elegans
WBGene00000236 bag-1 F57B10.11 Caenorhabditis elegans
WBGene00000249 bir-1 T27F2.3 Caenorhabditis elegans
WBGene00000250 bir-2 C50B8.2 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  At 20 Centigrade: 48-72 hours after L4-adult molt. 5-6 days after first cleavage. 2-days post-L4 adult hermaphrodite Ce WBls:0000065

0 Processes

4 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001598 glh-1 T21G5.3 Caenorhabditis elegans
WBGene00001601 glh-4 T12F5.3 Caenorhabditis elegans
WBGene00003992 pgl-1 ZK381.4 Caenorhabditis elegans
WBGene00003994 pgl-3 C18G1.4 Caenorhabditis elegans

0 Regulated By Molecule