WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Ballgown was used to calculate differential expression of genes using FPKM data and to generate tables with fold change and P values. Genes were shortlisted with a cutoff of 2-fold change and P values of less than 0.05. Description  Transcripts that showed significantly increased expression after infection by C. neoformans H99.
Primary Identifier  WBPaper00059754:C.neoformans_H99_upregulated Regulated By Treatment  Bacteria: C.neoformans strain H99

0 Anatomy Terms

709 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000008 aat-7 F54D12.3 Caenorhabditis elegans
WBGene00000114 alh-8 F13D12.4 Caenorhabditis elegans
WBGene00000144 apc-10 F15H10.3 Caenorhabditis elegans
WBGene00000213 asm-3 W03G1.7 Caenorhabditis elegans
WBGene00000232 avr-14 B0207.12 Caenorhabditis elegans
WBGene00000251 bli-1 C09G5.6 Caenorhabditis elegans
WBGene00000302 cav-2 C56A3.7 Caenorhabditis elegans
WBGene00000412 cdr-1 F35E8.11 Caenorhabditis elegans
WBGene00000442 ceh-19 F20D12.6 Caenorhabditis elegans
WBGene00000530 clh-3 E04F6.11 Caenorhabditis elegans
WBGene00000601 col-12 F15H10.1 Caenorhabditis elegans
WBGene00000640 col-64 F52F12.2 Caenorhabditis elegans
WBGene00000660 col-85 T21B4.2 Caenorhabditis elegans
WBGene00000674 col-99 F29C4.8 Caenorhabditis elegans
WBGene00000781 cpr-1 C52E4.1 Caenorhabditis elegans
WBGene00000782 cpr-2 F36D3.9 Caenorhabditis elegans
WBGene00000799 crn-6 K04H4.6 Caenorhabditis elegans
WBGene00000846 cup-5 R13A5.1 Caenorhabditis elegans
WBGene00000872 cyk-1 F11H8.4 Caenorhabditis elegans
WBGene00000915 hsp-90 C47E8.5 Caenorhabditis elegans
WBGene00000986 dhs-23 R08H2.1 Caenorhabditis elegans
WBGene00001059 dpf-6 F44B9.1 Caenorhabditis elegans
WBGene00001107 dsl-5 F58B3.8 Caenorhabditis elegans
WBGene00001129 dyf-13 C27H5.7 Caenorhabditis elegans
WBGene00001158 ech-9 F01G10.3 Caenorhabditis elegans
WBGene00001225 eif-3.B Y54E2A.11 Caenorhabditis elegans
WBGene00001334 ero-1 Y105E8B.8 Caenorhabditis elegans
WBGene00001391 far-7 K01A2.2 Caenorhabditis elegans
WBGene00001395 fat-3 W08D2.4 Caenorhabditis elegans
WBGene00001439 fkh-7 F26D12.1 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

0 Regulated By Gene

0 Regulated By Molecule