WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Cluster :

Algorithm  Cufflinks 2.2.1 Description  Transcripts that showed significantly decreased expression in PVD neurons isolated from TV22833 wyIs840(ser2prom3::daf-12a(rh273)::gfpnovo2, Pmyo-2::gfp); wyIs592(ser2prom3::myr-gfp), comparing to in PVD neurons isolated from animals that only expressed wyIs592.
Primary Identifier  WBPaper00058678:DAF-12_downregulated_PVD
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1 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of two interneurons with cell bodies situated laterally in the posterior body. PVD   WBbt:0006831

136 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000047 acr-8 ZC504.2 Caenorhabditis elegans
WBGene00000280 cah-2 D1022.8 Caenorhabditis elegans
WBGene00000441 ceh-18 ZC64.3 Caenorhabditis elegans
WBGene00000664 col-89 F17C8.2 Caenorhabditis elegans
WBGene00000685 col-111 F29B9.9 Caenorhabditis elegans
WBGene00000902 daf-6 F31F6.5 Caenorhabditis elegans
WBGene00000930 dao-4 ZC373.6 Caenorhabditis elegans
WBGene00000984 dhs-21 R11D1.11 Caenorhabditis elegans
WBGene00001055 dpf-2 C27C12.7 Caenorhabditis elegans
WBGene00001099 dsc-4 K02D7.4 Caenorhabditis elegans
WBGene00001248 elp-1 F38A6.2 Caenorhabditis elegans
WBGene00001479 fmo-4 F53F4.5 Caenorhabditis elegans
WBGene00003542 nas-23 R10H1.5 Caenorhabditis elegans
WBGene00003573 ncx-8 C13D9.7 Caenorhabditis elegans
WBGene00004216 ptr-1 C24B5.3 Caenorhabditis elegans
WBGene00004219 ptr-4 C45B2.7 Caenorhabditis elegans
WBGene00004264 qua-1 T05C12.10 Caenorhabditis elegans
WBGene00004398 rol-8 ZK1290.3 Caenorhabditis elegans
WBGene00005018 sqt-3 F23H12.4 Caenorhabditis elegans
WBGene00005133 srd-55 K02A2.2 Caenorhabditis elegans
WBGene00005150 sre-2 C41C4.2 Caenorhabditis elegans
WBGene00005949 srx-58 C29F3.6 Caenorhabditis elegans
WBGene00006063 sto-1 F08C6.4 Caenorhabditis elegans
WBGene00006217 str-173 Y17G9A.1 Caenorhabditis elegans
WBGene00006746 unc-6 F41C6.1 Caenorhabditis elegans
WBGene00006893 spon-1 F10E7.4 Caenorhabditis elegans
WBGene00007267 C03A3.2 C03A3.2 Caenorhabditis elegans
WBGene00007331 pho-11 C05C10.4 Caenorhabditis elegans
WBGene00007458 ule-4 C08F11.11 Caenorhabditis elegans
WBGene00007459 C08F11.12 C08F11.12 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038

0 Processes

1 Regulated By Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000908 daf-12 F11A1.3 Caenorhabditis elegans

0 Regulated By Molecule