WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F39H11.2b Sequence Name  F39H11.2b
Length (nt)  1527   Chromosome Location  I: 8698316-8698372
Chromosome . Primary Identifier  I Chromosome Location . Start  8698316
Chromosome Location . End  8698372
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39H11.2b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE42480 TLF-1, isoform b 57.8 508 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00069896
WBRNAi00070255
WBRNAi00025446
WBRNAi00046795
WBRNAi00025447
WBRNAi00069902
WBRNAi00081375
WBRNAi00069901
WBRNAi00069898
WBRNAi00069903
WBRNAi00116752
WBRNAi00088902
WBRNAi00000053
WBRNAi00069897
WBRNAi00069900
WBRNAi00069899
WBRNAi00096838
WBRNAi00070252
WBRNAi00070254
WBRNAi00070253
WBRNAi00088861
WBRNAi00088875
WBRNAi00084571
WBRNAi00069904
WBRNAi00088940

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F39H11.2b 8698316 8698372 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006577 tlf-1 F39H11.2 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:F39H11.2b 8698316 8698372 -1
CDS:F39H11.2b 8698449 8698515 -1
CDS:F39H11.2b 8698568 8698884 -1
CDS:F39H11.2b 8699795 8700073 -1
CDS:F39H11.2b 8700120 8700215 -1
CDS:F39H11.2b 8700263 8700499 -1
CDS:F39H11.2b 8700759 8700874 -1
CDS:F39H11.2b 8701341 8701422 -1
CDS:F39H11.2b 8701527 8701637 -1
CDS:F39H11.2b 8701717 8701843 -1
CDS:F39H11.2b 8701920 8701957 -1

1 Sequence

Length
1527

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F39H11.2b.1 F39H11.2b.1 2197   I: 8697662-8701973