WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Expressed strong GFP fluorescence in hyp 3 and hyp 5, the most anterior cells in the hypodermis, and in the intestine. This expression began at the L1 stage and continued throughout adulthood. Weaker fluorescence was also observed in other hypodermal cells throughout the animal, particularly in later stages of development. Primary Identifier  Expr1214
Remark  This fusion gene was able to rescue the Nrf and pale egg phenotypes of nrf-6 mutant animals.

13 Anatomy Terms

Definition Name Synonym Primary Identifier
A chain of very large cuboidal cells forming a wide central lumen in which food arrives from the posterior pharynx, is digested, and from which waste products proceed to the rectum. Intestinal rings form in groups of two and four cells surrounding the common lumen; thus the epithelium is only one cell deep at any point, with neighboring cells firmly secured to their neighbors by apical adherens junctions. These cells have very large nuclei and many large vacuoles, yolk granules, and other inclusions; the latter increase in number and electron density as the animal ages. intestine gut WBbt:0005772
entire syncytium of hyp7 hyp7 syncytium hyp7 WBbt:0005734
Cylindrical hypodermal syncytium in head hyp3 lineage name: ABplaapaaaa WBbt:0004690
Cylindrical hypodermal syncytium in head hyp4 lineage name: ABarpapapa WBbt:0004687
Cylindrical hypodermal syncytium in head hyp1 lineage name: ABalpaapppa WBbt:0004694
Tail ventral hypodermis hyp10 lineage name: ABplppppppp WBbt:0004378
Tail ventral hypodermis, 8th hypodermis cell hyp8   WBbt:0004381
Tail ventral hypodermis, 9th hypodermis cell hyp9   WBbt:0004380
Cylindrical hypodermal syncytium in head hyp2 lineage name: ABalpaapppp WBbt:0004692
Tail dorsal hypodermis hyp11 lineage name: Cpappv WBbt:0004377
Cylindrical hypodermal syncytium in head hyp5 lineage name: ABarpappap WBbt:0004685
Preanal hypodermis hyp12 lineage name: P12.pa WBbt:0004376
Cylindrical hypodermal syncytium in head hyp6 lineage name: ABarpaapaa WBbt:0004679

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003813 nrf-6 C08B11.4 Caenorhabditis elegans

1 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  A developemental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until death. postembryonic Ce WBls:0000022