WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  In embryos NCK-1A is expressed in neuroblasts in the anterior, lateral and posterior regions of the embryo. NCK-1A is also expressed in the hypodermal cells of the developing embryo. During the Larval stages, animals show NCK-1A expression in the head neurons, dorsal nerve cord (DNC), motor neurons in the ventral nerve cord and some tail neurons. In adult animals NCK-1A is expressed in the VC neurons, commissure neurons, head and tail neurons, SDQ neurons, mechanosensory neurons (PLM, PVM, and AVM), CAN neurons, HSN neurons, uterine-seam cell (utse), spermathecal-uterine junction (sujn), and excretory canal cell. NCK-1A is also expressed in uv2 and uv3 cells of the developing uterus. In males, NCK-1A is expressed in all the ray sub lineages and the adult male tail. NCK-1A promoter were expressed in head neurons, ventral and dorsal nerve cords, CANs, HSNs, the Q neuroblast descendants SDQs, mechanosensory neurons, hypodermal cells and the spermathecal-uterine junction. The NCK-1A isoform was expressed exclusively in the motor neurons and VC neuronal cell bodies, the excretory canal cell, uterus (utse, uv2 and uv3 cells), the ray sub lineage and male tail. Primary Identifier  Expr9213
Subcellular Localization  NCK-1A is predominantly localized to the cytoplasm.
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24 Anatomy Terms

Definition Name Synonym Primary Identifier
A valve tissue that connects the spermatheca and the uterus of a hermaphrodite gonad. spermathecal-uterine junction sp-ut valve WBbt:0006756
a large process bundle that runs along the vental mid-line extending from the ventral region of the nerve ring. ventral nerve cord ventral cord WBbt:0005829
neuron with its cell body situated in the head, excluding the pharynx. head neuron   WBbt:0006751
neuron with its cell body situated in the tail, posterior to rectum. tail neuron   WBbt:0006759
Neuron class of six motoneurons in the ventral cord, which innervate ventral body muscles and the vm2 muscles of the vulva. VC neuron   WBbt:0005304
Herm. specific motor neurons (die in male embryo), innervate vulval muscles, serotonergic HSNL lineage name: ABplapppappa WBbt:0004758
Herm. specific motor neurons (die in male embryo), innervate vulval muscles, serotonergic HSNR lineage name: ABprapppappa WBbt:0004757
H-shaped cell associated with the excretory system, largest cell in C. elegans. excretory cell excretory canal cell WBbt:0005812
A blast cell from which a neuron develops. neuroblast   WBbt:0008594
a bundle of nerve processes that runs along the dorsal mid-line of the animal. dorsal nerve cord dorsal cord WBbt:0006750
posterior region, from rectum to the end tail   WBbt:0005741
membranous cell attaches the uterus to the lateral epidermis (seam) and forms a thin laminar process dorsal to the vulva. formed by fusion of eight pi cell progeny and AC. uterine seam cell utse WBbt:0006789
Ant. lateral interneuron, process projects into ring SDQR lineage name: QR.pap WBbt:0004991
Neuron class of one sensory neuron, anterior ventral microtubule cell, touch receptor. AVM lineage name: QR.paa WBbt:0003832
Neuron class of one neuron, posterior ventral microtuble cell, touch receptor. PVM lineage name: QL.paa WBbt:0004086
Posterior lateral microtubule cell, touch receptor PLML lineage name: ABplapappppaa WBbt:0004104
Posterior lateral microtubule cell, touch receptor PLMR lineage name: ABprapappppaa WBbt:0004103
Process runs along excretory canal, no synapses, essential for survival CANL lineage name: ABalapaaapa WBbt:0004949
Process runs along excretory canal, no synapses, essential for survival CANR lineage name: ABalappappa WBbt:0004947
uterine-vulva cell, distal (of three ut cells) to the vulva. uv3   WBbt:0006793
uterine-vulval cell, medial position of three ut cells. uv2   WBbt:0006792
male sensory organ; nine bilateral pairs of finger-like rays (numbered 1 to 9, Left/Right) radiate from the tail and are embedded in a cuticlar fan. ray male sensory ray WBbt:0006941
Posterior lateral interneuron, process projects into ring SDQL lineage name: QL.pap WBbt:0004993
primary cell type that forms the hypodermis. hypodermal cell   WBbt:0007846

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006410 nck-1 ZK470.5 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The whole period of embryogenesis in the nematode Caenorhabditis elegans, from the formation of an egg until hatching. embryo Ce WBls:0000003