WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  Most of the GFP produced from pCHE-2::GFP3 was localized at the cilia of most ciliated sensory neurons. This could be seen most clearly in amphid sensory neurons, whose cilia are fasciculated. The processes and cell bodies showed only faint fluorescence, and the nuclei were not fluorescent. The che-2::GFP transgenics pCHE-2::GFP1 and pCHE-2::GFP2 first expressed GFP in some head neurons between the comma and 1.5-fold stage of embryogenesis. The number of cells expressing GFP increased, as the development proceeded to the adult stage. The expression at the adult stage was detected in all the amphid sensory neurons except AFD, phasmid neurons PHA and PHB, all the inner and outer labial neurons (IL1, IL2, OLQ and OLL), CEP, PDE, FLP, PQR, and three unidentified neurons (perhaps AQR and ADEL/R). Thus, che-2 seems to be expressed in all the ciliated sensory neurons except BAG and AFD. GFP expression in N2 male tails, where there are many male-specific sensory neurons required for mating behavior. GFP was expressed at least in all the rays, which have ciliated sensory neurons. Primary Identifier  Expr1157
Remark  Reporter gene fusion type not specified. Subcellular Localization  cilia
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71 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of one sensory neuron, basal body, not part of a sensillum, projects into preanal gangion. PQR lineage name: QL.ap WBbt:0004096
Neuron, dopaminergic of postderid sensillum PDEL lineage name: V5L.paaa WBbt:0004383
Neuron, dopaminergic of postderid sensillum PDER lineage name: V5R.paaa WBbt:0004382
Inner labial neuron IL1VR lineage name: ABarapppppaa WBbt:0004547
Inner labial neuron IL1DR lineage name: ABalappppaaa WBbt:0004737
Inner labial neuron IL1L lineage name: ABalapaappaa WBbt:0004553
Inner labial neuron IL1R lineage name: ABalaappppaa WBbt:0004551
Inner labial neuron IL1VL lineage name: ABalppapppaa WBbt:0004549
Inner labial neuron IL1DL lineage name: ABalapappaaa WBbt:0004738
Phasmid neurons, probably chemosensory PHAL lineage name: ABplpppaapp WBbt:0004366
Phasmid neurons, probably chemosensory PHAR lineage name: ABprpppaapp WBbt:0004365
neuron of the amphid sensillum amphid neuron amphid sensory neuron WBbt:0005394
Phasmid neurons, probably chemosensory PHBL lineage name: ABplapppappp WBbt:0004364
Phasmid neuron, probably chemosensory PHBR lineage name: ABprapppappp WBbt:0005659
Post-embryonic cell of pedigree V6L.pppapaaa, male sensory rays, neuron, striated rootlet. R4AL lineage name: V6L.pppapaaa WBbt:0004030
Post-embryonic cell of pedigree V6R.pppapaaa, male sensory rays, neuron, striated rootlet. R4AR lineage name: V6R.pppapaaa WBbt:0004029
Post-embryonic cell of pedigree V6L.papapaaa, male sensory rays, neuron, striated rootlet. R2AL lineage name: R2L.aaa WBbt:0004042
Post-embryonic cell of pedigree V6R.papapaaa, male sensory rays, neuron, striated rootlet. R2AR lineage name: R2R.aaa WBbt:0004041
Anterior deirid, sensory neuron, dopaminergic ADEL lineage name: ABplapaaaapa WBbt:0004009
Anterior deirid, sensory neuron, dopaminergic ADER lineage name: ABprapaaaapa WBbt:0004007
Cephalic neurons, contain dopamine CEPVL lineage name: ABplpaappppa WBbt:0004933
Cephalic neurons, contain dopamine CEPVR lineage name: ABprpaappppa WBbt:0004931
Cephalic neurons, contain dopamine CEPDL lineage name: ABplaaaaappa WBbt:0004938
Cephalic neurons, contain dopamine CEPDR lineage name: ABarpapaappa WBbt:0004937
Lateral outer labial neurons OLLL lineage name: ABalppppapaa WBbt:0004445
Lateral outer labial neurons OLLR lineage name: ABpraaapapaa WBbt:0004444
Post-embryonic cell of pedigree V6L.papppapa, male sensory rays, neuron, darkly staining tip, open to outside. R3BL lineage name: V6L.papppapa WBbt:0004034
Post-embryonic cell of pedigree V6R.papppapa, male sensory rays, neuron, darkly staining tip, open to outside. R3BR lineage name: V6R.papppapa WBbt:0004033
Post-embryonic cell of pedigree TL.appaaapa, male sensory rays, neuron, darkly staining tip, open to outside. R8BL lineage name: TL.appaaapa WBbt:0003990
Male sensory rays, neuron, darkly staining tip, open to outside R8BR lineage name: TR.appaaapa WBbt:0003988

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000484 che-2 F38G1.1 Caenorhabditis elegans

6 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The C. elegans life stage spanning 620-800min(hatch) after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. A stage after elongation is over. The last stage of embryogenesis. Also called pre-hatched embryo, late embryo or morphogenetic embryo. fully-elongated embryo Ce WBls:0000021
  The C. elegans life stage spanning 520-620min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and tripple fold. A stage between 2-fold embryo and fully-elongated embryo. Also called pretzel embryo or pretzel stage. 3-fold embryo Ce WBls:0000020
  The C. elegans life stage spanning 420-460min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and fold back 50%. A stage between comma embryo and 2-fold embryo. 1.5-fold embryo Ce WBls:0000018
  The C. elegans life stage spanning 390-420min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo looks like a comma. A stage between bean embryo and 1.5-fold embryo. comma embryo Ce WBls:0000017
  The C. elegans life stage spanning 460-520min after first cleavage at 20 Centigrade. Cell number remains at ~560 cells, with some new cells generated and some cells go through programmed cell death. The shape of embryo is elongated and double fold. A stage between 1.5-fold embryo and 3-fold embryo. 2-fold embryo Ce WBls:0000019
  A developemental life stage of the nematode Caenorhabditis elegans that occurs from egg hatching until death. postembryonic Ce WBls:0000022