WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

Expression Pattern :

Pattern  PDF-2::GFP signals could be observed throughout post-embryonic life. The PDF-2::GFP-expressing cells were identified as the interneurons BDUL/R, AVG, AIML/R, RIS, AVD and PVT, the chemosensory neuron pairs PHA and PHB, the motor neurons RID and RIML/R, the sensory neurons AQR and PQR, and less frequently in the PVPL/R interneurons. Outside the nervous system, strong expression was observed in rectal gland cells rectD and rectVL/R, the intestino-rectal valve cells virL/R and three posterior arcade cells in the head. Weak GFP fluorescence could also be observed in four additional head neurons that could not be unequivocally identified. GFP fluorescence was visible in neuronal cell bodies, axons and dendrites. Primary Identifier  Expr9959

27 Anatomy Terms

Definition Name Synonym Primary Identifier
Neuron class of one sensory neuron, basal body, not part of a sensillum, projects into preanal gangion. PQR lineage name: QL.ap WBbt:0004096
neuron with its cell body situated in the head, excluding the pharynx. head neuron   WBbt:0006751
Neuron class of one interneuron, projects along ventral cord to ring. PVT lineage name: ABplpappppa WBbt:0004070
Interfacial (hypodermal) cells which connect the hypodermal epithelium of the lips to the pharyngeal epithelium, firmly binding the inner tissue (the pharynx) to the outer bodywall (the hypodermis). arcade cell   WBbt:0005793
Ring interneuron AIML lineage name: ABplpaapppa WBbt:0003983
Ring interneuron AIMR lineage name: ABprpaapppa WBbt:0003969
Phasmid neurons, probably chemosensory PHAL lineage name: ABplpppaapp WBbt:0004366
Phasmid neurons, probably chemosensory PHAR lineage name: ABprpppaapp WBbt:0004365
Phasmid neurons, probably chemosensory PHBL lineage name: ABplapppappp WBbt:0004364
Phasmid neuron, probably chemosensory PHBR lineage name: ABprapppappp WBbt:0005659
Neuron class of one ring motoneuron, projects along dorsal cord, innervates dorsal body muscle. RID lineage name: ABalappaapa WBbt:0003938
Intestino-rectal valve virL lineage name: ABprpappppp WBbt:0004511
Intestino-rectal valve virR lineage name: ABprpappppa WBbt:0004510
Neuron, process runs along excretory canal and into ring, unique darkly staining synaptic vesicles BDUL lineage name: ABarppaappp WBbt:0003812
Neuron, process runs along excretory canal and into ring, unique darkly staining synaptic vesicles BDUR lineage name: ABarpppappp WBbt:0003811
Ring motor neuron RIMR lineage name: ABprppaapap WBbt:0005053
Ring motor neuron RIML lineage name: ABplppaapap WBbt:0003926
Neuron class of one ring interneuron. RIS lineage name: ABprpappapa WBbt:0005045
Interneuron, cell body in lumbar ganglion, projects along ventral cord to nerve ring PVPL lineage name: ABplppppaaa WBbt:0004082
Interneuron, cell body in lumbar ganglion, projects along ventral cord to nerve ring PVPR lineage name: ABprppppaaa WBbt:0004078
Neuron class of one sensory neuron, basal body; not part of a sensillum, projects into ring. AQR lineage name: QR.ap WBbt:0003927
Rectal epithelial cells, adjacent to intestino-rectal valve, have microvilli rect_D lineage name: ABplpappppp WBbt:0004788
Rectal epithelial cells, adjacent to intestino-rectal valve, have microvilli rect_VL lineage name: ABplppppaap WBbt:0004787
Rectal epithelial cells, adjacent to intestino-rectal valve, have microvilli rect_VR lineage name: ABprppppaap WBbt:0004776
Neuron class of one ventral cord interneuron, few synapses. AVG lineage name: ABprpapppap WBbt:0003850
Ventral cord interneuron, synapses onto VA, DA, AS motorneurons; formerly called delta. AVDL lineage name: ABalaaapalr WBbt:0003866
Ventral cord interneuron, synapses onto VA, DA, AS motorneurons; formerly called delta. AVDR lineage name: ABalaaapprl WBbt:0003865

1 Genes

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00018590 pdf-2 F48B9.4 Caenorhabditis elegans

5 Life Stages

Remark Definition Other Name Public Name Primary Identifier
  The second stage larva. At 25 Centigrade, it ranges 25.5-32.5 hours after fertilization, 11.5-18.5 hours after hatch. L2 larva Ce WBls:0000027
  The fourth stage larva. At 25 Centigrade, it ranges 40-49.5 hours after fertilization, 26-35.5 hours after hatch. L4 larva Ce WBls:0000038
  The first stage larva. At 25 Centigrade, it ranges 14-25.5 hours after fertilization, 0-11.5 hours after hatch. L1 larva Ce WBls:0000024
  The stage that begins when a C.elegans individual is fully-developed and has reached maturity. adult Ce WBls:0000041
  The third stage larva. At 25 Centigrade, it ranges 32.5-40 hours after fertilization, 18.5-26 hours after hatch. L3 larva Ce WBls:0000035